Topic: virology Goto Github
Some thing interesting about virology
Some thing interesting about virology
virology,glimmer - genetics information gathering CLI tool.
User: 0x0is1
Home Page: https://strinth.github.io/DrHelp
virology,Primer Bookdown de Virología en Español
User: aimergdiaz
virology,A fast and accurate tool for genotyping haploid individuals (such as SARS-CoV-2)
Organization: algolab
Home Page: https://algolab.github.io/MALVIRUS
virology,An influenza virus model examining the effects of cellular regeneration on cell-to-cell and cell-free viral transmission.
User: athaun
virology,NGS data analysis scripts for HBV elimination research group
User: babinyurii
virology,NGS data analysis scripts for HBV elimination research group
User: babinyurii
virology,genetic distance plotting for recombination events analysis
User: babinyurii
virology,A web tool for recombination events analysis in viral genomes. Django based version of recan
User: babinyurii
Home Page: http://yuriyb.pythonanywhere.com
virology,workflow and notes on large virus genome assembly and snp call using FastQC, Trimmomatic, bowtie2, and samtools.
User: babinyurii
virology,The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from visualization and interactive exploration
Organization: bluebrain
Home Page: https://portal.bluebrain.epfl.ch/resources/software/exploration/
virology,Infectious Disease Sequencing Platform
Organization: chanzuckerberg
Home Page: https://czid.org/
virology,Circular particle counter for electron microscope images
User: corriegunter
virology,Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical biologists and wet-lab personnel to do metagenomics/viromics analyses themselves, without bioinformatics expertise.
User: dennisschmitz
virology,Repository for animal tracking project TRKIR
User: eliabrodsky
virology,:headphones: Papers discussed on various shows on MicrobeTV
User: erictleung
virology,This is a project for Northwestern's CIS395 course in DataScience. This project implements a pipeline to determine genetic distance between all coronavirus genomes contained in the NIH Coronavirus dataset.
User: gbwiersum
virology,Dr. Buqing Yi
User: genomesurveillance
virology,2019 Wuhan Coronavirus data (COVID-19 / 2019-nCoV)
User: globalcitizen
virology,Files and methodology pertaining to the sequencing and analysis of SARS-CoV-2, causative agent of COVID-19.
User: jaleezyy
virology,Data and code related to the Janies Lab Variant Dashboard for SARS-CoV-2
Organization: janieslab
Home Page: https://janieslab.github.io/sars-cov-2
virology,Automated Genomics Application for Variant Exploration (AGAVE)
Organization: jhuapl-bio
Home Page: https://jhuapl-bio.github.io/AGAVE
virology,Detect iSNV and construct whole viral genomes from metagenomic samples
User: joon-klaps
Home Page: https://joon-klaps.github.io/viralgenie/
virology,Analysis of insertions in the genomes and proteins of coronaviruses. Illustration: AvH. (2020). Covid-19 cracked <http://doi.org/10.5281/zenodo.3734643>
User: jvanheld
Home Page: https://jvanheld.github.io/SARS-CoV-2_origins
virology,These are scripts relevant to the study of sapovirus intrahost and interhost genome evolution. The scripts are relevant to (1) the mining of inter-genotype evolution, (2) within and between-host sapovirus genome evolutionary analyses, (3) sapovirus genetic divergence and diversity.
User: kagningemma
virology,Code and data used in Mollentze et al. (2022) "Variation in the ACE2 receptor has limited utility for SARS-CoV-2 host prediction".
User: nardus
virology,Code and data used in Mollentze et al. (2021) "Identifying and prioritizing potential human-infecting viruses from their genome sequences".
User: nardus
virology,Quality of life improvement scripts for working with https://phaster.ca (PHAge Search Tool Enhanced Release)
User: naturepoker
virology,Drug Resistance Genotyping of antiviral treated Herpesviruses
User: ojcharles
Home Page: http://cmv-resistance.ucl.ac.uk/herpesdrg
virology,Database of herpesvirus antiviral resistance mutations
User: ojcharles
virology,A Panel progressive web app for synonymous recoding of viral genomes with CpG dinucleotides
User: oleksulkowski
Home Page: https://oleksulkowski.github.io/Syn-CpG-Spacer/app/
virology,Imputation of missing interactions using SVD
Organization: poisotlab
Home Page: https://poisotlab.github.io/ms_svd_imputation/
virology,Code of the article that describes the molecular epidemiology analyses of OsHV-1 virus by whole genome sequencing approaches in French shellfish growing areas.
User: propan2one
virology,SARS-CoV-2 Peptide Vaccine, Gen 11
Organization: rapid-deployment-vaccine-collaborative
virology,SARS2seq is a pipeline designed to process raw FastQ data from targeted SARS-CoV-2 sequencing and generate biologically correct consensus sequences of the SARS-CoV-2 genome.
Organization: rivm-bioinformatics
Home Page: https://rivm-bioinformatics.github.io/SARS2seq/
virology,TrueConsense is a consensus caller for viral-targets that create biologically correct consensus sequences. TrueConsense keeps track of open reading frames, compensates for common sequencing or alignment artefacts, and is able to generate consensus sequences on multiple coverage-thresholds at the same time
Organization: rivm-bioinformatics
Home Page: https://rivm-bioinformatics.github.io/TrueConsense/
virology,ViroConstrictor is a pipeline designed to process raw FastQ data from viral amplicon-based sequencing and generate biologically correct consensus sequences of the given viral genome
Organization: rivm-bioinformatics
Home Page: https://rivm-bioinformatics.github.io/ViroConstrictor/
virology,Unpivoted and cleaned data sets on the COVID-19 pandemic
Organization: starschema
Home Page: https://starschema.github.io/COVID-19-data
virology,BioMight - Human Biological Animation Engine
User: surferjim
virology,hmmcluster - Hidden Markov Model clustering of nucleotide sequences. O Charles & R Goldstein.
Organization: ucl-pathgenomics
virology,Corona Virus 3D
User: urish
Home Page: https://corona360.web.app
virology,Nextstrain community build 'Molecular epidemiology of Chikungunya virus'
Organization: viennarna
virology,Nextstrain community build 'Molecular epidemiology of Venezuelan equine encephalitis complex viruses'
Organization: viennarna
virology,Imputing the mammalian virome with the LF-SVD model
Organization: viralemergence
virology,Reconstruction and analysis of viral and host genomes at multi-organ level
Organization: viromelab
virology,The art of decorating a phage genome by gluing feature cutouts into it.
User: voorloopnul
Home Page: https://labs.voorloop.com/decouphage/
virology,A software to detect virome-wide integrations
User: xunchen85
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