Topic: genomics-data Goto Github
Some thing interesting about genomics-data
Some thing interesting about genomics-data
genomics-data,List of online databases and resources for Mycobacterium Tuberculosis
User: a-r-j
genomics-data,An R script to perform two sample Mendelian randomization screening (with TwoSampleMR) for a custom summary statistic against a set of summary statistics from the IEU GWAS database.
User: acdbio
genomics-data,An analysis of SARS-CoV-2 genomic sequencing scenario in Brazil
User: agenorrneto
genomics-data,Sup. Table 1 from Rodríguez-Gijón and Nuy et al., 2022 (Front. in Microbiology)
User: alejandrorgijon
Home Page: https://doi.org/10.3389/fmicb.2021.761869
genomics-data,Website to host AmpliconSuite outputs, including AA outputs and resulting focal amplification classifications, such as ecDNA.
Organization: ampliconsuite
Home Page: https://AmpliconRepository.org
genomics-data,Manifestation of the Lottery Ticket Phenomena in supervised, reinforcement and unsupervised learning.
User: arnaudfickinger
genomics-data,simON-reads ("Simulate Oxford Nanopore Reads") is a simple yet powerful tool to generate fastq files containing MiniON-like long reads
User: astrabert
Home Page: https://astrabert.github.io/simON-reads/
genomics-data,The bioinformatic analysis pipelines and scripts used for de novo genome assembly and analysis of filarial parasites Mansonella perstans and Mansonella ozzardi
User: awormguy
genomics-data,STARVar:Symptom based Tool for Automatic Ranking of Variants using evidence from literature and genomes
Organization: bio-ontology-research-group
genomics-data,This repo contains pipeline implemented using the nextflow workflow management system for the analysis of genomics data
Organization: biodata-fun
genomics-data,Genomic linked data converter. Interchange GFF, GVF, VCF files via JSON.
Organization: biointerchange
genomics-data,Datastores for reads, not your papa's FASTQ files.
Organization: biojulia
genomics-data,Ontology for consent codes and data use requirements
Organization: ebispot
genomics-data,🧬 gnomAD Python API is used to obtain data from gnomAD (genome aggregation database).
User: furkanmtorun
genomics-data,:chart_with_downwards_trend: Disk Storage of Compressed k-mer Dictionaries, with or without Random Access in Main Memory.
User: gengrim76
genomics-data,Experimental R bindings to the native GenomicsDB library
Organization: genomicsdb
genomics-data,Pandas ExtensionDtypes for dealing with genomics data
Organization: halllab
genomics-data,Genomic Data Commons API wrapper
Organization: histolab
genomics-data,This repository contains the answers for coursera 's "Bioconductor for Genomic Data Science"
User: holubievillya
genomics-data,This repository contains the answers for coursera 's "Command Line Tools for Genomic Data Science"
User: holubievillya
genomics-data,This repository contains the answers for coursera 's "Statistics for Genomic Data Science"
User: holubievillya
genomics-data,The GitHub repository for genomic data science is a collection of resources, tools, and code snippets for analyzing and interpreting genomic data.
User: ijazali678
Home Page: https://ijazalijin.wordpress.com/
genomics-data,A web application for interactive visualization and exploratory data analysis of variant call matrices
Organization: ipk-bit
Home Page: https://divbrowse.ipk-gatersleben.de
genomics-data,MITx - MicroMasters Program on Statistics and Data Science - Data Analysis: Statistical Modeling and Computation in Applications - Second Project
User: jajokine
genomics-data,These are scripts relevant to the study of sapovirus intrahost and interhost genome evolution. The scripts are relevant to (1) the mining of inter-genotype evolution, (2) within and between-host sapovirus genome evolutionary analyses, (3) sapovirus genetic divergence and diversity.
User: kagningemma
genomics-data,A bash script for downloading sequence datasets from PlasmoDb, a Plasmodium informatics resource
User: kevin-wamae
genomics-data,Miscellaneous R script to wrangle data and generate visualizations
User: kpatel427
genomics-data,R AnnotationDB resources like org.db, tx.db for various fungal species
User: lakhanp1
genomics-data,R script employed in the manuscript 'Genomic signatures of clonality in the deep water kelp Laminaria rodriguezii' to compute the distribution of FIS across loci into discrete classes
User: lauricreynes
genomics-data,Get precomputed gene age maps (phylomaps) in R
User: lotharukpongjs
Home Page: https://lotharukpongjs.github.io/phylomapr/
genomics-data,Applying R and Bioconductor to assess DNA Methylation
User: lucianhunguyen
genomics-data,This repository streamlines the conversion of raw DNA sequencing data from FASTQ to BAM format, incorporating scripts that not only facilitate BAM conversion but also generate Sequence Alignment Map (SAM) files.
User: mansikath
genomics-data,Development repository for the Bioconductor package 'mixOmics '
User: mixomicsteam
Home Page: http://mixomics.org/
genomics-data,Benchmarks for classification of genomic sequences
Organization: ml-bioinfo-ceitec
genomics-data,FauxFlow - Analyze Single Cell Genomics Data in a Flow Cytometry Paradigm
User: nathansiemers
genomics-data,NCBI Datasets is a new resource that lets you easily gather data from across NCBI databases.
Organization: ncbi
Home Page: https://www.ncbi.nlm.nih.gov/datasets
genomics-data,ILIAD: A suite of automated Snakemake workflows for processing genomic data for downstream applications
User: ncherric
Home Page: https://iliad.readthedocs.io/
genomics-data,Implementation of https://doi.org/10.1016/j.ygeno.2022.110414
Organization: omics-lab
Home Page: https://omics-lab.com/virustaxo
genomics-data,Python package to access the genomics and epidemiology data and Research Library metadata compiled and standardized on outbreak.info
Organization: outbreak-info
Home Page: https://outbreak-info.github.io/python-outbreak-info
genomics-data,R package to access the genomics and epidemiology data and Research Library metadata compiled and standardized on outbreak.info.
Organization: outbreak-info
Home Page: https://outbreak-info.github.io/R-outbreak-info/
genomics-data,Using Convolutional Neural Networks to model an association between a genomic sequence and the number of sequenced reads that align to it
User: petermchale
genomics-data,A python library to develop genomic data simulators
User: remytuyeras
Home Page: http://www.normalesup.org/~tuyeras/node_diss/blg/haplodx.html
genomics-data,Generative Art NFTs from Genomic Data
User: s1monj
Home Page: https://towardsdatascience.com/creating-generative-art-nfts-from-genomic-data-16a48ae4df99
genomics-data,In this project, we address three potential challenges for secure sharing and count query execution on the genomic data: data privacy, query privacy, and output privacy.
User: safiur-mahdi
genomics-data,Sentieon DNAscope + Machine Learning Model
Organization: sentieon
genomics-data,Sentieon DNAseq
Organization: sentieon
genomics-data,CellRank's reproducibility repository.
Organization: theislab
Home Page: https://cellrank.org
genomics-data,🧮 🔢 Generate multi-sample k-mer count matrix from WGS
User: tseemann
genomics-data,2024 BreedWheat Genomic Selection pipeline
User: vangiangtran
genomics-data,Genomic BigData Warehousing with Apache Spark and LakeHouse Architecture
User: victorskl
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