Topic: fasta Goto Github
Some thing interesting about fasta
Some thing interesting about fasta
fasta,A Go package for engineering organisms.
Organization: bebop
Home Page: https://pkg.go.dev/github.com/bebop/poly
fasta,tidy processing of biological sequences in R
Organization: biogenies
Home Page: https://BioGenies.github.io/tidysq/
fasta,Parse and process FASTA and FASTQ formatted files of biological sequences.
Organization: biojulia
Home Page: https://biojulia.dev
fasta,Syntax highlighting for computational biology
Organization: biosyntax
Home Page: http://bioSyntax.org
fasta,Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.
User: bjornfjohansson
fasta,pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)
User: brentp
Home Page: https://github.com/quinlan-lab/hts-python
fasta,compare sequences to a shared root reference sequence.
User: brwnj
Home Page: https://brwnj.github.io/idplot/
fasta,Fast FASTA/Q parser and writer (C++ re-implementation of kseq library)
User: cartoonist
fasta,A tool for concatenating multiple fasta alignments for supermatrix phylogenetic analyses
User: chriscreevey
fasta,MView extracts and reformats the results of a sequence database search or multiple alignment.
User: desmid
fasta,Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
User: edgardomortiz
fasta,GET_HOMOLOGUES: a versatile software package for pan-genome analysis
User: eead-csic-compbio
fasta,Goalign is a set of command line tools and an API to manipulate multiple sequence alignments. It is implemented in Go language.
Organization: evolbioinfo
fasta,Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
Organization: gabaldonlab
fasta,A tool for domain based annotation with databases from the Conserved Domains Database
User: iquasere
fasta,Bioinformatics library in Kotlin
Organization: jetbrains-research
fasta,Versatile FASTA/FASTQ demultiplexer.
User: jfjlaros
fasta,FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinformatics projects.
User: josiahseaman
fasta,Renderers and renderer extensions for JupyterLab
Organization: jupyterlab
fasta,Nucleotide Archival Format - Compressed file format for DNA/RNA/protein sequences
User: kirillkryukov
Home Page: http://kirill-kryukov.com/study/naf/
fasta,A Go package for designing DNA.
User: koeng101
fasta,Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input directory and merges everything into a single output directory. Auto-detects input file formats. Can submit the results to multiple repositories from the command line.
User: maximilianh
fasta,Randomly subsample sequencing reads or alignments
User: mbhall88
Home Page: https://doi.org/10.21105/joss.03941
fasta,Simulate metagenomic short reads from one or more populations.
Organization: merenlab
fasta,memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping
User: muellan
fasta,command line bioinformatic scripts written in R
User: olgatsiouri1996
fasta,Generate unique KMERs for every contig in a FASTA file
Organization: opengene
fasta,SeqAn's official repository.
Organization: seqan
Home Page: https://www.seqan.de
fasta,The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
Organization: seqan
Home Page: https://www.seqan.de
fasta,A cross-platform and ultrafast toolkit for FASTA/Q file manipulation
User: shenwei356
Home Page: https://bioinf.shenwei.me/seqkit
fasta,Software for prediction of plasmid sequences in metagenomic assemblies
User: smaegol
fasta,:rocket: seqfu - Sequece Fastx Utilities
User: telatin
Home Page: https://telatin.github.io/seqfu2
fasta,Tools for querying and analysis of genomic data
User: tjparnell
Home Page: http://tjparnell.github.io/biotoolbox/
fasta,A robust and fast clustering method for amplicon-based studies
User: torognes
fasta,Versatile open-source tool for microbiome analysis
User: torognes
fasta,Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.
Organization: wtsi-hpag
fasta,toolkit for file system virtualisation of random access compressed FASTA, FAI, DICT & TWOBIT files
User: yhoogstrate
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