merenlab Goto Github PK
Name: Meren Lab
Type: Organization
Location: Germany
Blog: http://merenlab.org
Meren Lab's Projects
anvio
An analysis and visualization platform for 'omics data
anvio.org
The anvi'o community web page
anviserver
The code behind anvi'server
barhal-bot
Our little Slack Bot that helps us keep an eye on our server
bsd-qbio3
BSD Bootcamp on Quantitative Biology 3
bsd-qbio4
Fourth BSD Quantitative Biology Bootcamp @ MBL
clusterize
The most basic SLURM wrapper
concoct
Clustering cONtigs with COverage and ComposiTion
gff_parser
Parser to add external gene calls and functional annotation from Prokka to Anvi'o.
google-scholar-parser
A set of Python utilities to parse Google Scholar data
homebrew-anvio
illumina-utils
A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.7+ pipeline).
mentorship-survey-workflow
merenlab-workflows
A repository with scripts to run pipeline that are commonly used in the Meren Lab
merenlab.org
Web content for Meren Lab
oligotyping
Exploring microbial patterns through subtle nucleotide variation within 16S rRNA gene tag sequences of closely related taxa
reads-for-assembly
Simulate metagenomic short reads from one or more populations.
saav-structural-mapping
Map single amino acid variants onto protein structures. Modus operandi: explore relationships between genetic variation and structural biology.
trna-seq-tools
world-map-r
A simple script to display stuff on a world map with R and ggplot
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