Topic: fasta-sequences Goto Github
Some thing interesting about fasta-sequences
Some thing interesting about fasta-sequences
fasta-sequences,Terminal App to find ORF
User: 0alphazero0
fasta-sequences,Program to clean DNA fasta sequences
User: abhijeetsingh1704
fasta-sequences,Removes duplicate sequences in multifasta file
User: abhijeetsingh1704
fasta-sequences,simple and convenient program to convert fasta sequences to fastq sequences
User: abhijeetsingh1704
fasta-sequences,Sequence clustering and database creation using mmseqs, from local fasta files
User: ajvelezrueda
fasta-sequences,An R script to measure the potential influence of different parameters that could have affected the speed of pairwise sequence alignment, using the functions of the Biostrings package.
User: amirreza-mousavi
fasta-sequences,An R script that calculates a similarity matrix for a list of protein sequences with the aid of Bleakley-Yamanishi Normalized Smith-Waterman Similarity Score.
User: amirreza-mousavi
fasta-sequences,SeqCutter is designed to extract specific subsequences from a FASTA file based on a cluster definition.
User: angelogith
fasta-sequences,omicR It creates fasta files, downloads genomes from NCBI using the refseq number, creates databases to run BLAST+, runs BLAST+ and filters these results to obtain the best match per sequence. These scripts can be used to run BLAST alignment of short-read (DArTseq data) and long-read sequences (Illumina, PacBio… etc).
User: btalamantesbecerra
fasta-sequences,omicR for R studio creates fasta files, downloads genomes from NCBI using the refseq number, creates databases to run BLAST+, runs BLAST+ and filters these results to obtain the best match per sequence. These scripts can be used to run BLAST alignment of short-read (DArTseq data) and long-read sequences (Illumina, PacBio… etc). You can use reference genomes from NCBI, or any other genetic sequence that you would like to use as reference.
User: btalamantesbecerra
fasta-sequences,Evolutionary Bioinformatics Toolkit (EBT)
Organization: chasewnelson
fasta-sequences,Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data
Organization: chasewnelson
fasta-sequences,A tool for manipulating fasta files and obtaining new sequence data from NCBI in fasta format
User: cnuge
fasta-sequences,Bioinformatics knowledge and tools.
User: erma0x
fasta-sequences,polyATGC pacbio or oxford nanopore long reads trimmer.
User: gauravcodepro
fasta-sequences,a pacbiohifi read check for the quick view of the read types.
User: gauravcodepro
fasta-sequences,CULSPIN- Computing ULam SPiral INdices tool
User: glezdiazh
fasta-sequences,
User: hoss3inf
fasta-sequences,Fasta_splitter
User: hounerx
fasta-sequences,Plasmidome analysis to track the transfer route of AMR genes in bacteria
User: ibrahimelzahaby
fasta-sequences,Warning: this tool is in early development stage, use with care.
User: jenche
fasta-sequences,FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinformatics projects.
User: josiahseaman
fasta-sequences,Shuffle the string sequences such that the k-mer frequency is preserved in each string
User: kchu25
fasta-sequences,A fully integrated K-mer Informed Toolkit for Bioinformatics
User: kit4b
fasta-sequences,Read a fasta sequence file, calculate base counts, print calculated base counts and print sequence length.
User: lakshanj98
fasta-sequences,genomic alignment similarity search tool
User: laurentnoe
Home Page: https://bioinfo.univ-lille.fr/yass/
fasta-sequences,Various utilities for working with FASTA nucleotide sequences
User: limitedeternity
Home Page: https://limitedeternity.github.io/FASTAUtils/
fasta-sequences,Idris (Idris2) port of the Haskell biocore library.
User: matthew-mosior
fasta-sequences,Idris (Idris2) port of the Haskell biofasta library.
User: matthew-mosior
fasta-sequences,Creating plots using FASTA amino-acid files
User: moozeq
fasta-sequences,Simple program which converts nucleotide sequence to amino acid sequences and does some length frequency analysis
User: moozeq
fasta-sequences,Sequence GC ratios and skew calculations
User: moozeq
fasta-sequences,This script allows us to generate ORF for a given Protein Sequence.
User: obliviateandsurrender
fasta-sequences,A small collection of one-liners in a one bash script for fasta files processing.
User: pavlohrab
fasta-sequences,Small and fast FASTA sequences length fetcher
User: picani
fasta-sequences,Reads a protein FASTA file and filters the proteins by organism name, protein name, or taxonomy ID to create a new, filtered file.
Organization: pnnl-comp-mass-spec
fasta-sequences,Class for reading Protein files, specifically .fasta files and certain tab-delimited formats
Organization: pnnl-comp-mass-spec
fasta-sequences,A small fasta CLI toolkit developed in Rust
User: pswsm
fasta-sequences,Split multi fasta file into single fasta files
User: ramsainanduri
fasta-sequences,大数据辅修毕业设计源码。《一个基于Hbase的用于管理FASTA格式生物信息数据的B/S架构应用的设计与实现》
User: rhylan2333
Home Page: https://www.bilibili.com/video/BV1bo4y1P7W4/
fasta-sequences,FastC aims to provide a simple way to do some quality control checks on treated sequence data. It is similar to FastQC allowing a comparative study between raw and processed data.
User: rodriguez-salarichs
fasta-sequences,A tool for predicting the effects of missense mutations on protein stability changes upon missense mutation using protein sequence only.
User: shahidiqb
fasta-sequences,SEquence DAtaset builder
Organization: sing-group
Home Page: http://www.sing-group.org/seda/
fasta-sequences,Team Genomics One is a group of Bioinformatics enthusiasts gathered together from around the globe , to learn and move forward in solving biological myths by analyzing various types of biological data. We believe Team Work is Dream Work!!!
User: sooraj14072001
fasta-sequences,Team Genomics One is a group of Bioinformatics enthusiasts gathered together from around the globe , to learn and move forward in solving biological myths by analyzing various types of biological data. We believe Team Work is Dream Work!!!
User: sooraj14072001
fasta-sequences,A naive implementation of a k-mer counter in Python, takes fasta files and k-mer length requests and outputs all k-mers of length k, their reverse complement, and their frequency within their respective sequence for each sequence in the file.
User: suchapalaver
fasta-sequences,Performs semi-global alignments on FASTA sequences. Homework 3 for Dr. Miller's Intro to Bioinformatics class.
User: xyaneon
fasta-sequences,fxtools: light-weight processing tool for FASTA/FASTQ/BAM format data
User: yangao07
fasta-sequences,PredicSites is a program allowing consensus patterns search on a DNA sequence.
User: yoannpa
fasta-sequences,Computational programs and algorithms used to convert information from biochemical experiments (DNA/RNA/Protein/DNA chip/NGS) into useful information and data.
User: zmmason
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