Topic: kmers Goto Github
Some thing interesting about kmers
Some thing interesting about kmers
kmers,kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.
User: akcorut
Home Page: https://github.com/akcorut/kGWASflow/wiki
kmers,Alignment-Free phylogenetic tree construction from .fasta sequence files
User: andriusbern
kmers,Analysis of DNA Sequence Classification Using Neural Networks - Bioinformatics Course Project - Winter 2022
User: arminzolfaghari
kmers,Alignment-free method to identify and analyse discriminant genomic subsequences within pathogen sequences
Organization: bioinfouqam
kmers,K-mer counting algorithms and count-data utilities for the BioJulia framework
Organization: biojulia
kmers,This is our implementation for D2 distance algorithm for k-mers.
User: bissim
kmers,Extract kmers, skipmers, minimizers.
Organization: dib-lab
kmers,An algorithm for finding SNPs of a long read compared to a reference genome
User: gabrielecanesi
kmers,The generation of a kmers dataset that is associated with multiple gene sequences and the further manipulation of this generated dataset are the main contents of the current project.
User: giostamoulos
kmers,NAUniSeq: A fast computational pipeline to search unique sequences for microbial diagnostics
User: gulshan-gaur
kmers,Tetemer, an R package and Shiny app for interactively fitting population parameters to k-mer spectra of diploids, triploids, and tetraploids (allo and auto)
User: hannesbecher
kmers,Fulgor is a fast and space-efficient colored de Bruijn graph index.
User: jermp
kmers,Benchmarks and evaluation scripts for the Fulgor index.
User: jermp
kmers,Very large scale k-mer counting and analysis on Apache Spark.
User: jtnystrom
Home Page: https://jnpsolutions.io/software/
kmers,Coding problems from course 1 of the Bioinformatics specialization
User: kalyaniasthana
Home Page: https://www.coursera.org/learn/dna-analysis
kmers,This is the repository of the pipeline META-DIFF, which detects sequences in differential abundances between two conditions, and annotates them taxonomicaly and functionaly.
User: louis-mg
kmers,[Features extraction method] You can find the new version of CASTOR_KRFE at https://github.com/bioinfoUQAM/CASTOR_KRFE
User: maremita
kmers,Evaluation of Statistical Linear Models for Genome Virus Classification
User: maremita
kmers,Extract SNPs and accessory differences in closely related bacterial genomes from k-mers
User: moorembioinfo
kmers,KmerCamel๐ซ provides implementations of several algorithms for efficiently representing a set of k-mers as a masked superstring.
User: ondrejsladky
kmers,Python assignment for my Bio-535 course at URI, Spring 2018.
User: panthijeeban
kmers,Rapid, Alignment-free, Phylogenetic Placement via Ancestral Sequences
Organization: phylo42
kmers,Screening Historical Events of Recombination in a Phylogeny via Ancestral Sequences
Organization: phylo42
kmers,Generate K-mer spectra to observe modalities of distributions
User: selvalakshmi27
kmers,fast and comprehensive k-mer counting package
User: slowikj
Home Page: https://slowikj.github.io/seqR/
kmers,A naive implementation of a k-mer counter in Python, takes fasta files and k-mer length requests and outputs all k-mers of length k, their reverse complement, and their frequency within their respective sequence for each sequence in the file.
User: suchapalaver
kmers,Bioinformatics 101 tool for counting unique k-length substrings in DNA
User: suchapalaver
kmers,Visualization package dedicated to kmeRs similarity score matrix
User: urniaz
Home Page: https://urniaz.github.io/HeatMap4kmeRs/
kmers,A collection of various biopython scripts.
User: victoria-r
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