Topic: high-throughput-sequencing Goto Github
Some thing interesting about high-throughput-sequencing
Some thing interesting about high-throughput-sequencing
high-throughput-sequencing,Resolution-independent normalization of Hi-C data
Organization: 3dgenomes
high-throughput-sequencing,uORF-Tools are a workflow and a collection of tools for the analysis of 'Upstream Open Reading Frames' (short uORFs)
User: biochemistry1-ffm
high-throughput-sequencing,VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications
Organization: bioinform
Home Page: http://bioinform.github.io/varsim/
high-throughput-sequencing,Sequence alignment tools
Organization: biojulia
high-throughput-sequencing,Sargasso disambiguates mixed-species high-throughput sequencing data.
Organization: biomedicalinformaticsgroup
Home Page: http://biomedicalinformaticsgroup.github.io/Sargasso/
high-throughput-sequencing,The AssayCorrector eliminates spatial bias in HTS assays using PMP methods.
User: bmazoure
high-throughput-sequencing,command-line querying+conversion of bigwigs and a nim wrapper for dpryan's libbigwig
User: brentp
high-throughput-sequencing,basepair bio: a single binary with many useful genomics subtools.
User: brentp
high-throughput-sequencing,nim-lang wrapper for https://github.com/38/d4-format
User: brentp
high-throughput-sequencing,use the noise
User: brentp
high-throughput-sequencing,nim wrapper for htslib for parsing genomics data files
User: brentp
Home Page: https://brentp.github.io/hts-nim/
high-throughput-sequencing,Perl, R, Python, and Bash Shell source codes for high-throughput sequencing (the 2nd, 3rd, and 4th generation sequencing for DNA, RNA, and Protein) data analysis by integrating lots of open-source tools or softwares.
User: ctlife
high-throughput-sequencing,ExpoSeq is a pipeline to process and analyze in various visualizations ngs data from phage display campaigns
Organization: digbiolab
high-throughput-sequencing,Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
User: edgardomortiz
Home Page: https://edgardomortiz.github.io/captus.docs/
high-throughput-sequencing,Barcode Generator
Organization: gear-genomics
Home Page: http://gear.embl.de/bgen
high-throughput-sequencing,hamPCR + Douglas-fir + needle fungi
User: gerverska
high-throughput-sequencing,Python library to access Gene Expression Omnibus Database (GEO)
User: guma44
high-throughput-sequencing,All codes about ExMdb data processing
User: hmu-bioserver
Home Page: http://www.bio-server.cn/ExMdb/
high-throughput-sequencing,Material used for a course on handling high-throughput genomic data handling, covering DNA sequence assembly, RNA-seq data analysis, metagenomics, and read alignment
User: jungsoh
high-throughput-sequencing,Distributed iterative finite element analysis with high throughput computing
User: kevin-fang
high-throughput-sequencing,Bayesian modelling approach for detecting RNA flexibility changes in high-throughput structure probing data under different conditions, based on an extension of the BUM-HMM method.
User: marangiop
high-throughput-sequencing,A series of scripts used for transferring and validating files with gluster, and for submitting condor jobs
User: matthewwolff
high-throughput-sequencing,Jupyter server for Duke Biostatistics and Bioinformatics high-throughput sequencing and analysis workshop summer 2017
User: mccahill
high-throughput-sequencing,MSKCC CMO Innovation Lab
User: ndbrown6
high-throughput-sequencing,Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.
User: nunofonseca
high-throughput-sequencing,Automated processing and haplotype inference for double-barcoded PCR amplicons
User: pblischak
Home Page: https://fluidigm2purc.readthedocs.io
high-throughput-sequencing,
User: pmenzel
high-throughput-sequencing,Processing, quality control and analysis of GAM datsets
Organization: pombo-lab
Home Page: http://gam.tools
high-throughput-sequencing,mGEMS Genomic epidemiology with mixed samples
Organization: probic
high-throughput-sequencing,mSWEEP High-resolution sweep metagenomics using fast probabilistic inference
Organization: probic
high-throughput-sequencing,Script to process illumina reads from museum specimens
User: rancilhac
high-throughput-sequencing,A summary of the scripts used in performing quality filtering and data analysis of Illumina high throughout bacterial sequences involved in this freshwater aquatic invertebrate microbiota study.
User: skroetsc-unb
high-throughput-sequencing,Find and visualize rearrangements in DNA sequences
User: smortezah
high-throughput-sequencing,Comparison of gene usage in immune repertoires under different biological conditions
User: snaketron
high-throughput-sequencing,Raesymatto: visualize genomic data
User: tare
high-throughput-sequencing,NGS Processing Pipelines for WGS and WES data
User: tjbencomo
high-throughput-sequencing, This package identifies differential expression in high-throughput 'count' data, such as that derived from next-generation sequencing machines, calculating estimated posterior likelihoods of differential expression (or more complex hypotheses) via empirical Bayesian methods.
User: tjh48
Home Page: https://bioconductor.org/packages/release/bioc/html/baySeq.html
high-throughput-sequencing,Identification of clusters of co-expressed genes based on their expression across multiple (replicated) biological samples.
User: tjh48
Home Page: https://bioconductor.org/packages/release/bioc/html/clusterSeq.html
high-throughput-sequencing,This package creates segmentation of the genome into regions of biological significance from high-throughput sequencing data.
User: tjh48
Home Page: https://bioconductor.org/packages/release/bioc/html/segmentSeq.html
high-throughput-sequencing,vSNP -- validate SNPs
Organization: usda-vs
high-throughput-sequencing,vSNP -- validate SNPs
Organization: usda-vs
high-throughput-sequencing,HiPR: High-throughput Probabilistic inference of RNA structure
Organization: wanglab-upenn
Home Page: http://lisanwanglab.org/HIPR
high-throughput-sequencing,A toolset for handling sequencing data with unique molecular identifiers (UMIs)
Organization: weng-lab
high-throughput-sequencing,Sequence peak caller
User: yudongfang-qin
high-throughput-sequencing,Infer metadata for your downstream analysis straight from your RNA-seq data
Organization: zavolanlab
high-throughput-sequencing,Custom plugins for the MultiQC tool.
Organization: zavolanlab
high-throughput-sequencing,Given a set of BAM files and a gene annotation BED file, calculates the Transcript Integrity Number (TIN) for each transcript.
Organization: zavolanlab
high-throughput-sequencing,
User: zhangchonglab
high-throughput-sequencing,RADx-rad pipeline for metagenomic data and analysis of SARS-CoV-2 from wastewater
User: zoophy
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.