Topic: rna-seq-analysis Goto Github
Some thing interesting about rna-seq-analysis
Some thing interesting about rna-seq-analysis
rna-seq-analysis,An Automated RNASeq Analysis Pipeline (Differential expression to gene enrichment)
User: ajitjohnson
Home Page: https://ajitjohnson.com/arseq/
rna-seq-analysis,A convenient pipeline for processing of multi-strain bacterial RNA-Seq experiments
User: apredeus
rna-seq-analysis,PyTorch Implementation of DeepSequence
User: arnaudfickinger
Home Page: https://www.nature.com/articles/s41592-018-0138-4
rna-seq-analysis,A pipeline for structural clustering of RNA secondary structures
Organization: backofenlab
rna-seq-analysis,Visual self-service analytics platform for big omics data.
Organization: bigomics
Home Page: http://www.bigomics.ch
rna-seq-analysis,A Snakemake pipeline to go from fastq mRNA sequencing files to raw and normalised counts (usable for downstream EDA and differential analysis)
Organization: bleekerlab
Home Page: https://snakemake-rnaseq-pipeline.readthedocs.io/en/latest/
rna-seq-analysis,Personalized Regression
User: blengerich
rna-seq-analysis,scripts for RNA-Seq analysis
User: bpucker
rna-seq-analysis,Tutorials, workflows, and convenience scripts for Single Cell Portal
Organization: broadinstitute
Home Page: https://singlecell.broadinstitute.org/single_cell
rna-seq-analysis,Rails/Docker application for the Broad Institute's single cell RNA-seq data portal
Organization: broadinstitute
Home Page: https://singlecell.broadinstitute.org
rna-seq-analysis,Make rapid visualizations of RNA-seq data in R
User: btmonier
rna-seq-analysis,Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
Organization: carpentries-incubator
Home Page: https://carpentries-incubator.github.io/bioc-rnaseq
rna-seq-analysis,Workflow management with Nextflow and nf-core
Organization: carpentries-incubator
Home Page: https://carpentries-incubator.github.io/workflows-nextflow/
rna-seq-analysis,Code, documentation, and tutorials for the DGD model trained on bulk RNA-Seq data.
Organization: center-for-health-data-science
Home Page: https://github.com/Center-for-Health-Data-Science/bulkDGD
rna-seq-analysis,Colorectal cancer CMs subtyping and personalized medication recommendation based on RNA seq pathway analysis
Organization: collaborativebioinformatics
rna-seq-analysis,群体遗传学分析中用到的script和skill等
User: crazzy-rabbit
rna-seq-analysis,
User: donalbonny
rna-seq-analysis,This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data
User: dragonmasterx87
rna-seq-analysis,Detecting Aberrant Splicing Events from RNA-sequencing data
User: dzhang32
Home Page: https://dzhang32.github.io/dasper/
rna-seq-analysis,miARma-seq: a comprehensive tool for miRNA, mRNA and circRNA analysis
User: eandresleon
rna-seq-analysis,:microscope: A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data
User: egaffo
rna-seq-analysis,A collection of R functions to aid in host-pathogen genomic research
Organization: elsayed-lab
rna-seq-analysis,Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
User: federicomarini
Home Page: https://federicomarini.github.io/GeneTonic
rna-seq-analysis,Interactive Differential Expression AnaLysis - DE made accessible and reproducible
User: federicomarini
Home Page: https://federicomarini.github.io/ideal/
rna-seq-analysis,pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
User: federicomarini
Home Page: https://federicomarini.github.io/pcaExplorer/
rna-seq-analysis,Automatic RNA-Seq Pipelines with Interactive Report
User: giuliospinozzi
Home Page: http://erc.martellilab.eu
rna-seq-analysis,Reference-guided transcript discovery and quantification for long read RNA-Seq data
Organization: goekelab
rna-seq-analysis,Clustering cells from single cell RNA seq assays
User: govinda-kamath
rna-seq-analysis,Analyze your RNA sequencing data without writing a single line of code
User: guyteichman
Home Page: https://guyteichman.github.io/RNAlysis/
rna-seq-analysis,scGEAToolbox: Matlab toolbox for single-cell gene expression analyses
User: jamesjcai
rna-seq-analysis,Interactive reporting tool for single cell RNA-seq data.
User: jarny
rna-seq-analysis,SNP-free RNA editing Identification Toolkit
User: jumphone
Home Page: http://sprint.tianlab.cn/
rna-seq-analysis,Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs
User: junchaoshi
rna-seq-analysis,Data-driven Network-based Bayesian Inference of Drivers
Organization: jyyulab
Home Page: https://jyyulab.github.io/NetBID/
rna-seq-analysis,Workflow management system for the automated and distributed analysis of large-scale experimental data.
User: klugem
rna-seq-analysis,An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study
Organization: maayanlab
Home Page: http://bit.ly/2g4hCe7
rna-seq-analysis,A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expression using RNA-sequencing data.
User: nalomran
rna-seq-analysis,a web-based R shiny application that wraps DESeq2 R package
User: nasqar
Home Page: http://nasqar.abudhabi.nyu.edu/deseq2shiny/
rna-seq-analysis,Scalable RNA-seq analysis
User: nellore
Home Page: http://nellore.github.io/rail
rna-seq-analysis,integrated RNA-seq Analysis Pipeline
User: nunofonseca
rna-seq-analysis,The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of mass spectrometry (MS) omics data, in particular proteomic (either at the peptide or the protein level), lipidomic, and metabolomic data.
Organization: pmartr
Home Page: https://pmartr.github.io/pmartR/
rna-seq-analysis,interactive Multi Objective K-mer Analysis
User: ritchielabigh
rna-seq-analysis,Snakemake based pipeline for RNA-Seq analysis
User: saketkc
rna-seq-analysis,Automated RNA-seq pipeline for lncRNA indentification
User: schosio
rna-seq-analysis,Fast in-silico normalization algorithm for NGS data
User: schulzlab
rna-seq-analysis,The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating from repeat sequences, recombinant B and T cell receptors, and microbial communities.
User: smangul1
Home Page: https://github.com/smangul1/rop/wiki
rna-seq-analysis,A comprehensive pipeline for RNAseq data analysis
User: sunyumail93
rna-seq-analysis,Reference mapping for single-cell genomics
Organization: theislab
Home Page: https://docs.scarches.org/en/latest/
rna-seq-analysis,GREIN : GEO RNA-seq Experiments Interactive Navigator
Organization: uc-bd2k
Home Page: https://shiny.ilincs.org/grein
rna-seq-analysis,An R-shiny app that provides backsplice and canonical splicing analysis for both circular RNA (circRNA) and parental transcripts
Organization: vccri
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