I install the software and run the test.The log file is below.
[INFO] 2019-10-19 06:47:40,949 start...
[INFO] 2019-10-19 06:47:40,950 logfile: pid28989.log.info
[WARNING] 2019-10-19 06:47:40,951 Re-write workdir
[INFO] 2019-10-19 06:47:40,952 options:
[INFO] 2019-10-19 06:47:40,952 {'sort_threads': 2, 'nodelist': '', 'rewrite': 1, 'blocksize': '1g', 'job_prefix': 'nextDenovo', 'job_type': 'local', 'minimap2_options_raw': '-x ava-ont -t 8', 'cns_threads': 15, 'sort_mem': '1g', 'seed_cutoff': '32000', 'input_fofn': '/data/software/NextDenovo/test_data/./input.fofn', 'read_cutoff': '1k', 'input_type': 'raw', 'sort_options': '-m 1g -t 2 -k 50', 'parallel_jobs': '2', 'cluster_options': '', 'ctg_graphdir': '/data/software/NextDenovo/test_data/./01_rundir/03.ctg_graph', 'pa_correction': '2', 'workdir': '/data/software/NextDenovo/test_data/./01_rundir', 'random_round': '10', 'minimap2_threads': (8, 8), 'minimap2_options_cns': '-x ava-ont -t 8 -k17 -w17', 'cns_aligndir': '/data/software/NextDenovo/test_data/./01_rundir/02.cns_align', 'seed_cutfiles': '2', 'raw_aligndir': '/data/software/NextDenovo/test_data/./01_rundir/01.raw_align', 'task': 'all', 'deltmp': 1, 'rerun': 3, 'correction_options': '-p 15 -max_lq_length 10000', 'nextgraph_options': '-a 1'}
[INFO] 2019-10-19 06:47:40,952 mkdir: /data/software/NextDenovo/test_data/./01_rundir
[INFO] 2019-10-19 06:47:40,953 mkdir: /data/software/NextDenovo/test_data/./01_rundir/01.raw_align
[INFO] 2019-10-19 06:47:40,953 mkdir: /data/software/NextDenovo/test_data/./01_rundir/02.cns_align
[INFO] 2019-10-19 06:47:40,953 mkdir: /data/software/NextDenovo/test_data/./01_rundir/03.ctg_graph
[INFO] 2019-10-19 06:47:40,954 analysis tasks done
[INFO] 2019-10-19 06:47:40,955 total jobs: 1
[INFO] 2019-10-19 06:47:40,956 Throw jobID:[29002] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/01.raw_align/01.db_split.sh.work/db_split0/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:47:41,635 db_split done
[INFO] 2019-10-19 06:47:41,636 analysis tasks done
[INFO] 2019-10-19 06:47:41,637 total jobs: 5
[INFO] 2019-10-19 06:47:41,638 Throw jobID:[29011] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/01.raw_align/02.raw_align.sh.work/raw_align0/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:47:42,140 Throw jobID:[29017] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/01.raw_align/02.raw_align.sh.work/raw_align1/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:47:44,229 Throw jobID:[29074] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/01.raw_align/02.raw_align.sh.work/raw_align2/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:47:45,404 Throw jobID:[29099] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/01.raw_align/02.raw_align.sh.work/raw_align3/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:47:47,565 Throw jobID:[29141] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/01.raw_align/02.raw_align.sh.work/raw_align4/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:47:51,040 raw_align done
[INFO] 2019-10-19 06:47:51,042 analysis tasks done
[INFO] 2019-10-19 06:47:51,043 total jobs: 2
[INFO] 2019-10-19 06:47:51,045 Throw jobID:[29206] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/01.raw_align/03.sort_align.sh.work/sort_align0/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:47:51,547 Throw jobID:[29212] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/01.raw_align/03.sort_align.sh.work/sort_align1/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:47:54,208 remove temporary result: /data/software/NextDenovo/test_data/01_rundir/01.raw_align/02.raw_align.sh.work/raw_align2/input.seed.002.2bit.2.ovl
[INFO] 2019-10-19 06:47:54,208 remove temporary result: /data/software/NextDenovo/test_data/01_rundir/01.raw_align/02.raw_align.sh.work/raw_align3/input.seed.002.2bit.3.ovl
[INFO] 2019-10-19 06:47:54,208 remove temporary result: /data/software/NextDenovo/test_data/01_rundir/01.raw_align/02.raw_align.sh.work/raw_align4/input.seed.002.2bit.4.ovl
[INFO] 2019-10-19 06:47:54,209 remove temporary result: /data/software/NextDenovo/test_data/01_rundir/01.raw_align/02.raw_align.sh.work/raw_align0/input.seed.001.2bit.0.ovl
[INFO] 2019-10-19 06:47:54,209 remove temporary result: /data/software/NextDenovo/test_data/01_rundir/01.raw_align/02.raw_align.sh.work/raw_align1/input.seed.001.2bit.1.ovl
[INFO] 2019-10-19 06:47:54,209 remove temporary result: /data/software/NextDenovo/test_data/01_rundir/01.raw_align/02.raw_align.sh.work/raw_align2/input.seed.001.2bit.2.ovl
[INFO] 2019-10-19 06:47:54,213 sort_align done
[INFO] 2019-10-19 06:47:54,214 analysis tasks done
[INFO] 2019-10-19 06:47:54,216 total jobs: 2
[INFO] 2019-10-19 06:47:54,217 Throw jobID:[29254] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/02.cns_align/01.get_cns.sh.work/get_cns0/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:47:54,719 Throw jobID:[29278] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/02.cns_align/01.get_cns.sh.work/get_cns1/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:48:01,304 get_cns done
[INFO] 2019-10-19 06:48:01,304 cns finished, and final corrected reads file:
[INFO] 2019-10-19 06:48:01,304 /data/software/NextDenovo/test_data/./01_rundir/02.cns_align/01.get_cns.sh.work/get_cns*/cns.fasta
[INFO] 2019-10-19 06:48:01,305 analysis tasks done
[INFO] 2019-10-19 06:48:01,306 total jobs: 3
[INFO] 2019-10-19 06:48:01,307 Throw jobID:[29330] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/02.cns_align/02.cns_align.sh.work/cns_align0/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:48:01,809 Throw jobID:[29337] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/02.cns_align/02.cns_align.sh.work/cns_align1/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:48:04,389 Throw jobID:[29388] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/02.cns_align/02.cns_align.sh.work/cns_align2/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:48:07,400 cns_align done
[INFO] 2019-10-19 06:48:07,401 analysis tasks done
[INFO] 2019-10-19 06:48:07,403 total jobs: 11
[INFO] 2019-10-19 06:48:07,404 Throw jobID:[29442] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/03.ctg_graph/01.ctg_graph.sh.work/ctg_graph00/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:48:07,906 Throw jobID:[29448] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/03.ctg_graph/01.ctg_graph.sh.work/ctg_graph01/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:48:08,610 Throw jobID:[29456] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/03.ctg_graph/01.ctg_graph.sh.work/ctg_graph02/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:48:09,112 Throw jobID:[29462] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/03.ctg_graph/01.ctg_graph.sh.work/ctg_graph03/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:48:09,762 Throw jobID:[29481] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/03.ctg_graph/01.ctg_graph.sh.work/ctg_graph04/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:48:10,282 Throw jobID:[29500] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/03.ctg_graph/01.ctg_graph.sh.work/ctg_graph05/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:48:11,198 Throw jobID:[29507] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/03.ctg_graph/01.ctg_graph.sh.work/ctg_graph06/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:48:11,907 Throw jobID:[29514] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/03.ctg_graph/01.ctg_graph.sh.work/ctg_graph07/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:48:12,656 Throw jobID:[29522] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/03.ctg_graph/01.ctg_graph.sh.work/ctg_graph08/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:48:13,158 Throw jobID:[29528] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/03.ctg_graph/01.ctg_graph.sh.work/ctg_graph09/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:48:13,826 Throw jobID:[29548] jobCmd:[/data/software/NextDenovo/test_data/01_rundir/03.ctg_graph/01.ctg_graph.sh.work/ctg_graph10/nextDenovo.sh] in the local_cycle.
[INFO] 2019-10-19 06:48:15,029 ctg_graph done
[INFO] 2019-10-19 06:48:15,030 nextDenovo finished
[INFO] 2019-10-19 06:48:15,030 final assembly file:
[INFO] 2019-10-19 06:48:15,030 /data/software/NextDenovo/test_data/./01_rundir/03.ctg_graph/01.ctg_graph.sh.work/ctg_graph*/nextgraph.assembly.contig.fasta
[INFO] 2019-10-19 06:48:15,031 final stat files:
[INFO] 2019-10-19 06:48:15,031 /data/software/NextDenovo/test_data/./01_rundir/03.ctg_graph/01.ctg_graph.sh.work/ctg_graph*/nextDenovo.sh.e