cjprybol Goto Github PK
Type: User
Bio: Directed evolution and biological design
cjprybol's Projects
biosequences.jl
Biological sequences for the julia language
eisenia
expectationmaximizationexample
Walkthrough of the example shown in Do, C. B., & Batzoglou, S. (2008). What is the expectation maximization algorithm? Nature Biotechnology, 26(8), 897–899. http://doi.org/10.1038/nbt1406
foobar_solutions
Jupyter notebooks of some google foobar challenge questions
gff3.jl
kmers.jl
In development: Kmer types and methods for julia
lightgraphs.jl
An optimized graphs package for the Julia programming language
mycelia
neurospora_bsa_mutation_mapper
pyrodigal
Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!
rbp
reproducibility-via-singularity
A demo and tutorial for how to use git and singularity to make your research more portable and reproducible
sars-cov2-pangenome-analysis
singularity-testing
static-demo
ucsv.jl
A Julia package for reading and writing delimited-text; µ in size, ∞ in flexibility
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