Comments (5)
moold
commented on May 28, 2024
How about your genome size and input data size?
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ruanyingfei
commented on May 28, 2024
my genome size is 27M and input data size is 9.1G.
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moold
commented on May 28, 2024
Could you paste the seq_stat result to here?
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moold
commented on May 28, 2024
BTW, do you use the latest version of NextDenovo?
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ruanyingfei
commented on May 28, 2024
Thank you very much! I've solved this problem, and I didn't get results before because the software I downloaded wasn't the latest version, and there was no nextgraph in its NextDenovo/bin directory, so there was no final assembly result.Thank you again!
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Related Issues (20)
- Assembly is running around a month and going strong - or is it stalled? HOT 15
- about the ParallelTask for the nextdenovo HOT 1
- NextDenovo Parent Job Failed, No Error, Subtasks still running HOT 1
- Low performance with highly repeated regions HOT 1
- non-zero exit status 137, error info: . - assembly still finishes though HOT 1
- Unable to run test data on macOS HOT 4
- Samtools sort out-of-memory HOT 1
- Segmentation fault (core dumped) at 03.ctg_graph/01.ctg_graph.sh.work/ctg_graph0 HOT 1
- Can you run nextDenovo without a config file? HOT 1
- TypeError: unsupported operand type(s) HOT 2
- long time for assemling genome HOT 6
- Can I assemble a gap free genome using only regular ONT data? HOT 1
- telomeres getting lost HOT 6
- [4501 ERROR] 2023-06-13 22:29:40 the input data is insufficient for an assembly. HOT 3
- No assembly file after running NextDenovo HOT 1
- sort_align step erro HOT 1
- Does NEXTDENOVO filter the contig before output? HOT 2
- Error: db_stat failed ? HOT 1
- ERROR：the input data is insufficient for an assembly HOT 3
- Question about error rate for correction HOT 1
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