Comments (5)
How about your genome size and input data size?
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my genome size is 27M and input data size is 9.1G.
from nextdenovo.
Could you paste the seq_stat result to here?
from nextdenovo.
BTW, do you use the latest version of NextDenovo?
from nextdenovo.
Thank you very much! I've solved this problem, and I didn't get results before because the software I downloaded wasn't the latest version, and there was no nextgraph in its NextDenovo/bin directory, so there was no final assembly result.Thank you again!
from nextdenovo.
Related Issues (20)
- sort_align step erro HOT 1
- Does NEXTDENOVO filter the contig before output? HOT 2
- Error: db_stat failed ? HOT 1
- ERROR:the input data is insufficient for an assembly HOT 3
- Question about error rate for correction HOT 1
- ctg_align failed HOT 4
- When run nextdenovo with test_data failed HOT 1
- hello , i used the nextdenovo to assemble the ultra large size genome of 23g, the fq only 270g, just want to assemble the grapgh HOT 7
- How to improve the N50 and reduce contigs numbers? HOT 7
- Test won't run HOT 1
- For low base quality of sequences HOT 1
- Timing out on minimap-nd tasks HOT 4
- I want to correct ONT with HiFi data HOT 1
- db_stat failed, @d84e39c8-130c-4159-bfa9-5393ad703a1a does not exist! HOT 2
- assembly problem HOT 2
- ctg_graph error, (core dumped), returned non-zero exit status 134".
- NextDeNovo running for >4days with no expected outputs HOT 22
- ModuleNotFoundError: No module named 'paralleltask' HOT 4
- Running out of disk space HOT 5
- Accepted a killed signal and killing all running jobs, please wait... HOT 1
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