alexvasilikop Goto Github PK
Name: Alexandros Vasilikopoulos
Type: User
Company: Genomics Core Leuven (UZ Leuven)
Bio: Bioinformatician - Genomics Core Leuven (UZ Leuven)
Twitter: avasilikop
Location: Leuven
Alexandros Vasilikopoulos's Projects
bio-playground
miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.
chromgenomeplot
A tool for analysis and visualization of various genomic features along the chromosomes of reference genome assemblies
fasta2tree
A simple computational workflow for inferring phylogenetic trees from a set of unaligned fasta files
genome_assembly_statistics
A simple python script to infer basic contiguity stats from a genome assembly fasta file
marcie
Mapping, variant calling and genotyping pipeline using paired-end Illumina short reads
orthograph
Orthology prediction using a graph-based, reciprocal approach with profile hidden Markov models
perl_scripts
Various perl scripts for various bioinformatic purposes
rotifer_phylogeny
rotifer phylogeny scripts
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