Topic: yeast Goto Github
Some thing interesting about yeast
Some thing interesting about yeast
yeast,Molecular biology-related analysis with a focus on yeast strains used in the AcubeSAT nanosatellite
Organization: acubesat
Home Page: https://gitlab.com/acubesat/su/biology/yeast-biology
yeast,UGDR: a pipeline to detect and analyze recombination in yeast.
User: animatardeb
yeast,Clb3-centered regulations are recurrent across distinct parameter regions in minimal autonomous cell cycle oscillator designs | Thierry D.G.A. Mondeel, Oleksandr Ivanov, Hans V. Westerhoff, Wolfram Liebermeister and Matteo Barberis | NPJ Syst. Biol. Appl. (2020) | https://doi.org/10.1038/s41540-020-0125-0
Organization: barberislab
Home Page: https://doi.org/10.1038/s41540-020-0125-0
yeast,Brouwsoftware
Organization: brewbuddyorg
yeast,R Scripts for quantification of microbial robustness from high-throughput screenings
User: cectri
yeast,Official and maintained implementation of the dataset paper "The TYC Dataset for Understanding Instance-Level Semantics and Motions of Cells in Microstructures" [ICCVW 2023].
User: christophreich1996
Home Page: https://christophreich1996.github.io/tyc_dataset/
yeast,An automated method to map yeast variants to proteins modifications and functional regions
Organization: csb-kul
yeast,A bioinformatic analysis was carried out with the goal of identifying carbohydrate-active enzymes in 332 published yeast genomes.
Organization: engqvistlab
yeast,Analysis of RNA binding by S. cerevisiae Ssd1, mostly CRAC sequencing data, August 2020 through June 2021
User: ewallace
yeast,Algorithm for round cells identification in the brightfield microscopy images.
User: fafa87
Home Page: http://www.cellstar-algorithm.org/
yeast,Scripts to download the PacBio, ONT and MiSeq datasets used in https://www.nature.com/articles/s41598-017-03996-z and run the pipelines as described in the paper or simply download the final assemblies as generated by the authors.
User: fg6
yeast,This recipe is dedicated to helping you make the best possible pizza dough for Neapolitan pizza.
User: hendricius
Home Page: https://pizza-calculator.the-bread-code.io/
yeast,Learn how to master the art of baking the programmer way.
User: hendricius
yeast,The package is used to conduct the mutation cluster analysis with aid of protein 3D structures for yeast.
User: hongzhonglu
yeast,Metadata files for the idr0040 submission
Organization: idr
yeast,Saccharomyces Genome Database (SGD) REST API wrapper
User: irahorecka
yeast,SYSBIO repository of ENG4BIO group within Universitat Autònoma de Barcelona (UAB) mainly regarding K. phaffi modelling.
User: kivazque
yeast,GitHub Repository associated with the piQTL project (Mapping effects of genome-wide genetic variation to protein-protein interactions reveals molecular mechanisms of complex traits) [ Serohijos & Michnick Lab, Université de Montréal ]
User: ladyson1806
Home Page: https://ladyson1806.github.io/SerohijosLab-piQTL/
yeast,Microscopy data analysis for the paper: "Redundancy and the role of protein copy numbers in the cell polarization machinery of budding yeast"
User: leilaicruz
yeast,This is the bioinformatics workflow notebook for the analysis of wet lab-derived Candida albicans RNA-seq samples for BIOL 379.
User: lil-qorgi
yeast,Code for the paper Upon accounting for the impact of isoenzyme loss, gene deletion costs anticorrelate with their evolutionary rates.
User: llambourne
yeast,Analysis of multiple yeast strains whole-genome knockout libraries 🔬📈
User: mgalardini
yeast,Tools for causal inference on yeast gene expression data.
Organization: michoel-lab
yeast,Phenotypic screening of a CRISPRi strain library [Smith et 2017, Mol Syst Biol (2017)13:913] for acetic acid tolerance targeting essential and respiratory essential genes in Saccharomyces cerevisiae
User: mukherjeevaskar267
yeast,Patch for LRSDAY v1.6 for Debian-based and SUSE-based OS.
User: nicolo-tellini
Home Page: https://github.com/yjx1217/LRSDAY
yeast,Part of MSc Biology Project (1/2). This repo contains three different analysis pipelines, which all analyse microscopy images of yeast cells. Two calculate Sfp1 NC ratios, and one calculates nuclear and whole-cell volumes.
User: olledejong
yeast,Hardware and software for accessible, extensible, and scalable bioreactors. Built on Raspberry Pi.
Organization: pioreactor
Home Page: https://pioreactor.com
yeast,Mathematica notebook to compare methods of ML for ribosom density on mRNA prediction
User: rretkute
yeast,This repository contains the code for the transposonmapper package to map the transposons from the SATAY sequencing data.
Organization: satay-ll
Home Page: https://satay-ll.github.io/Transposonmapper/Introduction.html
yeast,SQLite database with beer brewing ingredients
User: sboulema
yeast,A program that uses the Synteny Index algorithm to compare between Eukaryotes.
User: spanishcat
yeast,Code-base for my ABC-selectivity paper in Current Biology
User: sriramsrikant
yeast,Supplementary code and results from doi:10.1101/2020.02.20.957662
Organization: sysbiochalmers
Home Page: https://www.biorxiv.org/content/10.1101/2020.02.20.957662v1
yeast,Genome-scale metabolic model of Rhodotorula toruloides
Organization: sysbiochalmers
yeast,Collection of scripts for improving lipid constraints in yeast-GEM
Organization: sysbiochalmers
yeast,The consensus GEM for Saccharomyces cerevisiae
Organization: sysbiochalmers
Home Page: http://sysbiochalmers.github.io/yeast-GEM/
yeast,HMM for annotating coding regions of DNA in S. cerevisiae chromosome III
User: tommakesthings
yeast,An open source predictive model of protein expression in yeast, written in Python.
Organization: yeastpro
yeast,LRSDAY: Long-read Sequencing Data Analysis for Yeasts
User: yjx1217
Home Page: https://yjx1217.github.io/Yeast_PacBio_2016/software/
yeast,Presentations and work done for University of Pittsburgh course, Synthetic Biology.
User: yogionbioinformatics
yeast,Simple aliases collection for YeAST
User: yvan-sraka
yeast,Using NVIDIA Deepmind's Nucleotide Transformer to generate embeddings for yeast genomes.
User: zbates1
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