Topic: metabolic-pathways Goto Github
Some thing interesting about metabolic-pathways
Some thing interesting about metabolic-pathways
metabolic-pathways,prepBioCyc: Preprocess BioCyc files
User: arbasher
metabolic-pathways,Go REST API to replace Genbank, Uniprot, Rhea, and CHEMBL
Organization: bebop
metabolic-pathways,:m: Metabolic network completion
Organization: bioasp
Home Page: https://bioasp.github.io/meneco
metabolic-pathways,Library to perform metabolic engineering tasks
Organization: brsynth
metabolic-pathways,
Organization: cnapy-org
metabolic-pathways,scCellFie, inspired by the MATLAB-based CellFie tool, offers advanced analysis of metabolic functions on Python using single-cell and spatial transcriptomics. Efficient and user-friendly, it integrates with Scanpy to extend CellFie's capabilities, enabling in-depth single-cell and spatial metabolic task analysis.
User: earmingol
metabolic-pathways,CHAP: Modeling Metabolic Pathways as Groups (with Augmentation)
Organization: hallamlab
metabolic-pathways,leADS: improved metabolic pathway inference based on active dataset subsampling
Organization: hallamlab
Home Page: https://github.com/hallamlab/leADS
metabolic-pathways,reMap: relabeling metabolic pathway data with groups to improve prediction outcomes
Organization: hallamlab
Home Page: https://github.com/hallamlab/reMap
metabolic-pathways,Metabolic pathway inference using non-negative matrix factorization with community detection
Organization: hallamlab
Home Page: https://github.com/hallamlab/triUMPF
metabolic-pathways,A tool for representing genomic potential and transcriptomic expression into KEGG pathways
User: iquasere
metabolic-pathways,Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks
User: jotech
metabolic-pathways,Web application of metabolics pathway visualisation, for the Gencovery business (https://gencovery.com/), created during the PDP project during the M1 of the Master of Bioinformatics, in Bordeaux.
User: mathieubolteau
metabolic-pathways,Toolkit for Modelling and Simulation of Gene Expressions and Metabolism
User: mauriceling
Home Page: https://github.com/mauriceling/advancesyntoolkit/wiki
metabolic-pathways,MNXref: Reconciliation of metabolites and biochemical reactions for metabolic networks
Organization: metanetx
metabolic-pathways,Diversity-based enumeration of optimal context-specific metabolic networks
Organization: metexplore
metabolic-pathways,A basic network of human metabolism, including key enzymes, intermediates, and hormonal influences
User: munozalexander
Home Page: https://munozalexander.github.io/MetNet/
metabolic-pathways,PathVisio plugin to find relevant metabolic reactions from Rhea
Organization: pathvisio
metabolic-pathways,Pipeline plugins for PALADIN, providing HPC support, abundance (taxonomy, go terms), customized reports, etc
User: toniwestbrook
metabolic-pathways,Infer metabolic directions from moment differences of mass-weighted intensity distributions
User: tubanlee
Home Page: https://doi.org/10.5281/zenodo.10616979
metabolic-pathways,Serves as the backend code for https://www.curatemetabolicpathways.com
User: willchenko
metabolic-pathways,Identifying reprogrammed metabolic routes given omics data.
User: y1zhou
Home Page: https://metabolike.readthedocs.io/
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