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Simon Frost's Projects

longp icon longp

Gaussian process regression + automatical model selection for logitudinal -omics data

lstm icon lstm

LSTM Neural Network in Python and Cython, used for language modelling

lzma-js icon lzma-js

A JavaScript implementation of the Lempel-Ziv-Markov (LZMA) chain compression algorithm

lzw-async icon lzw-async

Asynchronous Javascript implementation of LZW compression algorithm

lzw-js icon lzw-js

LZW encoding and decoding of Strings in JavaScript.

magnet icon magnet

MAGNET: Understanding and Improving the Accuracy of Genome Pre-Alignment Filtering

mariophaser icon mariophaser

A simple test for phaser creating a Super Mario Bros clone.

mccortex icon mccortex

De novo genome assembly and multisample variant calling

measles icon measles

Codes for simulating different measles models

mers-treedater icon mers-treedater

Example of using treedater on MERS-CoV data from Dudas et al. (2017)

mevr icon mevr

Molecular epidemiology of viruses in R

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