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minhash-1

Example Python code for comparing documents using MinHash

minialign

fast and accurate alignment tool for PacBio and Nanopore long reads

minimal-django-file-upload-example

Source code for example at http://stackoverflow.com/questions/5871730/need-a-minimal-django-file-upload-example

minimappy

Python bindings to minimap2

mkboost

A machine learning approach to identify hosts of families of viruses.

mkl4deb

Adding the Intel MKL to a Debian / Ubuntu system via one simple script

mlehaplo

mlehaplo-1

Maximum Likelihood Estimation for Viral Populations

mmseqs2

MMseqs2: ultra fast and sensitive search and clustering suite

model-runner-zoo

Examples of models plus connectors for the model runner

mogp

Multi-Output Gaussian Processes

moma

Multi-agent model of Ae. aegypti, dengue vector

morton_filter

mosquito-beats

A CNN based classifier for mosquito species based on their wing-beat patterns.

mosquito-breeding-sites-detector-v2

Detecting Potential Mosquito Breeding Sites using Deep Learning

mosquito-js

An annoying mosquito created with the web audio api.

mosquito-monitoring

Identify mosquito species and collect data to anticipate epidemics propagation

mosquito_breeding_sites_detector

Detecting Potential Mosquito Breeding Sites using Deep Learning

mrbayes_kernel

A Jupyter/IPython kernel for MrBayes

mrgbp

Metagenomic Binning through Multi-resolution Genomic Binary Patterns

multi-language-demo

Material to accompany https://blog.jupyter.org/i-python-you-r-we-julia-baf064ca1fb6

multidsk

Simultaneous kmer counting for multiple values of k. Extension of dsk (http://minia.genouest.org/dsk/) for multiple values of k.

muscatupa

Multi-scale Turing patterns generator

naive_bayes

A Naive Bayes classifier for metagenomic data.

ncbi-blast-dbs

Fast download BLAST databases from NCBI.

ncbi-genome-download

Scripts to download genomes from the NCBI FTP servers

ncbitax2lin

Convert NCBI taxonomy dump into lineages

neighbor-joining

Rapid Neighbor-Joining phylogenetic tree creation method implementation for Node.js

netlogo-bitstring

A bitstring class for netlogo

neural-networks-and-deep-learning

Code samples for my book "Neural Networks and Deep Learning"