sdwfrost Goto Github PK
Name: Simon Frost
Type: User
Company: Microsoft
Bio: Principal Data Scientist, Microsoft Health; Professor of Pathogen Dynamics, LSHTM
Twitter: sdwfrost
Location: Redmond, WA, USA
Name: Simon Frost
Type: User
Company: Microsoft
Bio: Principal Data Scientist, Microsoft Health; Professor of Pathogen Dynamics, LSHTM
Twitter: sdwfrost
Location: Redmond, WA, USA
15418 Final Project Site
Snakemake workflows as command line utilities
Empower Sequence Labeling with Task-Aware Neural Language Model | a PyTorch Tutorial to Sequence Labeling
A Systematic Bayesian Integration of Epidemiological and Genetic Data
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
Annotated Genome Aligner
Models created by the Concord Consortium using AgentScript
An htmlwidgets package allowing incorporation of Agentscript models into R Markdown documents
Metadata and some analysis for the aging study
My solutions to problems from ROSALIND, Project Euler, and courses I have taken. This includes my own implementations of various data structures.
sequence alignment. global, local, glocal.
Javascript alignment viewer
An example of ancestral reconstruction in HyPhy
Efficient Estimation of Evolutionary Distances
A Galaxy based platform for analysing immunoglobulin repertoires
Artificial neural Networks for VIral Lineages
distance based phylogenetic placement
Pipeline components for real-time virus analysis
Web app for visualizing pathogen evolution
My bachelor thesis project titled "Protein Classification using Machine Learning Techniques" source code
RPi Pico Tests & Samples
What started out as a terrain generator ended up being something akin to bacteria growing in a petri dish.
BALTIC - adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation.
count DNA sequence reads in BAM files
Basic Sequence Taxonomy Annotator
An implementation of a small MCMC framework and some likelihood functions for doing Bayes stats in the browser.
Code for the Bayesian Synthetic Likelihood paper by Price et al 2018 in the Journal of Computational and Graphical Statistics (volume 27, issue 1, pages 1-11)
Bayesian multi-object tracking
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.