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sniffles

Structural variation caller using third generation sequencing

snpeff

somatic_pipeline

sourcetracker

sp500_ml

Forecasting S&P500 log returns with machine learning

spade

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/spade.html Contributions: http://cytospade.org. Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=spade.

spark

Mirror of Apache Spark

spark-sframe

This project contains the code to translate between Apache Spark and SFrame.

sparse-unifrac

A Python implementation of memory-efficient (sparse) UniFrac.

spbtest3

Test package for the Single Package Builder

spectrum-of-differentiation-supplements

Mirror of analysis files for "Single-Cell RNA-Sequencing Reveals a Continuous Spectrum of Differentiation in Hematopoietic Cells"

splatter

Simple simulation of single-cell RNA sequencing data

spyder

Official repository for Spyder - The Scientific PYthon Development EnviRonment

sql_class

SQL for Marketers Class on Udemy

sqtlseeker

R package to detect splicing QTLs (sQTLs)

sra-tools

SRA Tools

srst2

Short Read Sequence Typing for Bacterial Pathogens

stamp

Statistical Analysis of Metagenomic Profiles

stan

Stan development repository (home page is linked below). The master branch contains the current release. The develop branch contains the latest stable development. See the Developer Process Wiki for details.

standard-raxml

standards

Navigate Common Core Mathematics standards.

star

RNA-seq aligner

star_wrapper_script

stat665

Course website for STAT 665

status_genome_2016

data and code for "Social status alters immune regulation and response to infection"

stringdb

Clustering and connections with STRINGdb's protein interaction database

strongly-connected-components

Find the strongly connected components in a graph

support

a place for all ZenHub customers

survivor

Toolset for SV detection for short reads

survivor_ant

A framework to compare SVs (vcf file) with previous known SVs (vcf file) and or with genomic features (gff and or bed files)