Comments (1)
ziyewang
commented on June 28, 2024
Hi,
Metabinner can be used for recovering prokaryotic bins. The sklearn warnings don't affect the results; there was an error with test_getmarker_3quarter.pl possibly due to the sequences not being able to identify the corresponding bacterial or archaeal single-copy marker genes (I can further confirm this issue if you could provide me with the log files. ).
When it comes to multi-sample cross-assemblies, it's recommended to provide each sample's data as individual files (Give all as individual samples sample1_R1/R2.fastq sample2_R1/R2.fastq etc).
Best,
Ziye
from metabinner.
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