Topic: nucleotides Goto Github
Some thing interesting about nucleotides
Some thing interesting about nucleotides
nucleotides,Needleman–Wunsch algorithm implementation in Go.
User: 0xnu
nucleotides,Needleman–Wunsch algorithm implementation in Lua.
User: 0xnu
nucleotides,FLiCK - Format LeveragIng Compression frameworK
User: aaiezza
nucleotides,Filter alignments on sequence length and/or identity of first nucleotide.
User: adomingues
nucleotides,MegaVir is a bioinformatic pipeline for virome characterization and genome assembly.
User: balazshorvathreal
nucleotides,No longer actively developed...See README
User: bhofmei
nucleotides,Nucleic and amino acid primitive types
Organization: biojulia
Home Page: https://biojulia.dev/BioSymbols.jl/stable/
nucleotides,Simple web-based DNA/RNAm prettifier. Includes Ribosomal translation too.
User: brayaniribe
Home Page: https://brayaniribe.github.io/dna-rnam-prettifier
nucleotides,A python package to compute clusters of sequence feature variant types (SFVTs) based upon user-selected subsequence.
User: burkesquires
nucleotides,Open source bioinformatics and computational biology toolbox written in F#.
Organization: csbiology
Home Page: https://csbiology.github.io/BioFSharp/
nucleotides,blast docker image and cyverse integration
Organization: cyverseuk
nucleotides,Implementation of space-saving three DNA sequences alignment
User: dangtunguyen
nucleotides,:package: Modstrings: implementation of Biostrings to work with nucleotide sequences containing modified nucleotides.
User: felixernst
Home Page: https://felixernst.github.io/Modstrings/
nucleotides,Numerical Encoding for Human Genetic Variants
Organization: genomicsplc
nucleotides,A tool to find amino acids associated with RNA and DNA nucleotide chains.
User: jancolon
nucleotides,Produces PDB files from given sequences.
User: jfkimberly
nucleotides,C++ nucleotide parser
User: jflopezfernandez
nucleotides,In this assignment, I had to create an application for a team of Bio-Informaticians to work on nucleotide multiple sequence alignments (MSA). The application is a command line application, no GUI is provided.
User: moutpessemier
nucleotides,Protein to RNA reverse translation
Organization: mutalyzer
nucleotides,Narrowly, Find sequences including nucleotide(or amino acid) spacers (Broadly, you can find the speific sequences of front and back while ignoring the middle sequences), and Write the result of finding them to csv files.(Language: Python3.9)
User: myon-bioinformatics
nucleotides,Used for counting the number of all four nucleotides and finding the percentage number of each of them
User: oliszymanski
nucleotides,Translation of the FASTA file with genetic code into aminoacid code.
User: orangepomeranian
nucleotides,A python script that implements an efficient algorithm for the Chimeric Alignment problem. A virus infects a bacterium and modifies a replication process in the bacterium by adding for each A an A sequence of length 1-5, for each C a C sequence of length 1-10, for each G a G sequence of length >= 1 and for each T a T sequence of length >= 1.
User: peteprattis
nucleotides,A Python script that implements a two player strategic game with two chromosomes having length n and m of nucleotides respectively. In each Round of the game a player can destroy one of the chromosomes and split the other into two non-empty parts. The player who deletes the last nucleotide wins.
User: peteprattis
nucleotides,A Python script that implements a two player strategic game with two sequences of length n and m nucleotides respectively. At each Round of the game a player can remove a random number of nucleotides from one sequence or the same number of nucleotides from both sequences. The player who removes the last nucleotide wins.
User: peteprattis
nucleotides,A Python script that implements an HMM with two states a and b. When the model is in state a it is more likely to emit purines A and G. When it is in state b it is more likely to emit pyramidines C and T. Decode the most likely sequence of states for the GGCT sequence using logarithmic scoring instead of normal probability scoring.
User: peteprattis
nucleotides,A Python script that for a parameter k, calculates the universal alignment of 2 sequences, with limitation that the alignment contains at most k unknown nucleotides. Nucleotide sequences are sometimes written in a 5-character alphabet, A, T, G, C, and N where N stands for an undefined nucleotide.
User: peteprattis
nucleotides,MerCat: python code for versatile k-mer counting and diversity estimation for database independent property analysis for meta -ome data
Organization: pnnl
Home Page: https://github.com/pnnl/mercat
nucleotides,This C program scans through DNA nucleotides and stores, then prints the 'words' of size 10 along with their locations.
User: r-amaro
nucleotides,MerCat2: python code for versatile k-mer counting and diversity estimation for database independent property analysis for metaome data
User: raw-lab
Home Page: https://github.com/raw-lab/mercat2/
nucleotides,Determine the thermodynamic properties for nucleotide conversions
Organization: roberts-farm-of-ideas
nucleotides,Extracts all of the possible genes from a string of DNA
User: sarthakkg
nucleotides,🧬 Python utilities for working with nucleotide sequence strings.
Organization: scbirlab
Home Page: https://streq.readthedocs.io
nucleotides,API repo: https://github.com/shamseen/pngcat-api
User: shamseen
Home Page: https://pngcat.netlify.app/
nucleotides,Small programs to parse and analyze sequence files. Misc programs
User: spencer-hs
nucleotides,This is a web application to count the nucleotides composition in a DNA sequence sample.
User: taofeekaoyusuf
nucleotides,Inferring likelihood and mutation rate of an evolutionary tree through the Jukes-Cantor model and Felsenstein’s algorithm
User: tommakesthings
nucleotides,Analysis of Sars Cov-2 Gene Mutations using Python Numpy and Matplotlib
User: tonygeorge1984
nucleotides,GenSkew is an application for computing and plotting nucleotide skew data.
Organization: univiecube
nucleotides,Convert output from Samtools pileup into a matrix.
User: wennj
nucleotides,deep learning experiments on biological sequences with PyTorch
User: xduan7
nucleotides,translation of nucleotide sequence to protein sequence in matlab
User: xendrra
nucleotides,Solidity implementations of well-known pairwise alignment methods such as Needleman-Wunsch's global sequence alignment and the Smith-Waterman local sequence alignment algorithm.
User: zenodeapp
nucleotides,📊🧬 Dinucleotide frequencies in the genome of model organisms 🐁🦠
User: zhukovanadezhda
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