Topic: cgmlst Goto Github
Some thing interesting about cgmlst
Some thing interesting about cgmlst
cgmlst,BSR-Based Allele Calling Algorithm
Organization: b-ummi
cgmlst,cgMLST.org webpage scraper. Download and list available schemes from cgMLST.org, and find their versions and last modification date and time.
User: bajicv
cgmlst,Enterobase scheme scraper. Download and list available schemes from Enterobase, and find their last modification date and time.
User: bajicv
cgmlst,PubMLST.org webpage scraper. Download and list available schemes and profiles from PubMLST.org, and find their last modification date using command line.
User: bajicv
cgmlst,Scripts to support clustering of cgMLST allele profiles
Organization: bccdc-phl
cgmlst,A cgMLST pipeline based on the KMA aligner
Organization: bccdc-phl
cgmlst,cg/wgMLST allele calling software, schema evaluation and allele distance estimation for outbreak reserch.
Organization: bu-isciii
cgmlst,PhyloTrace is a GUI platform for a fully controllable cgMLST analysis workflow.
User: infinity-a11y
Home Page: https://www.PhyloTrace.com
cgmlst,Proof of concept implementation for indexed similarity search of a cgMLST profile against a database.
User: kriskiil
cgmlst,SISTR (Salmonella In Silico Typing Resource) command-line tool
Organization: phac-nml
cgmlst,mlst2dist.py computes a distance matrix from a chewBBACA MLST alleles table, using Hamming Distance modified with correction for missing data
User: tripitakit
cgmlst,🐻⇔🐨 Calculate distance matrix from ChewBBACA cgMLST allele call tables
User: tseemann
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