Tim's Projects
An end to end, vendor neutral MRF package
Magnetic Resonance Imaging (MRI) Simulation Code in Python
MRI simulator for educational purposes written in MATLAB
A Numerical Magnetic Resonance Imaging (MRI) Simulation Platform
Julia Package for MRI Reconstruction
Specialized tools for MRI
Stanford University Rad229 Class Code: MRI Signals and Sequences
David Attenborough narrates your life
The containers can be used in combination with our transparent singularity or neurocommand tool, that wrap the executables inside a container to make them easily available for pipelines
The plug-and-play, browser-accessible, containerised data analysis environment.
Processing tools for high-resolution neuroimaging
A module for working with NMR data in Python
Publication-ready NN-architecture schematics.
Matlab code for performing image reconstruction in MRI and performing the NORDIC denoising
Numerical Tours of Signal Processing
openpilot is an open source driver assistance system. openpilot performs the functions of Automated Lane Centering and Adaptive Cruise Control for 250+ supported car makes and models.
GPU-based Total (Generalized) Variation implementation for various applications, with Python and Matlab wrappers.
Open source framework for pulse sequences
This is a collection of various Pulseq tutorials, which is supposed to grow in future
Simple Python version management
Pulseq in Python
Example client/server example for the streaming ISMRM Raw Data protocol
Quantitative MRI Made Easy with qMRLab: MRI software for data Simulation, analysis and visualization
Hongfu Sun's MATLAB codes for QSM reconstruction pipeline.
A set of tools for processing Quantitative MR Images
RatLesNetv2 is convolutional neural network for rodent brain lesion segmentation.
Primal-Dual Solver for Inverse Problems
Matlab code for reproducing 2019 IEEE Tr. Comp. Im. paper "Efficient Dynamic Parallel MRI Reconstruction for the Low-Rank Plus Sparse Model" by Claire Lin
U-Net based automatic Rat brain-mask Segmentation tool, developed by Hsu