Tim's Projects
Official AFNI source and documentation
Advanced Normalization Tools (ANTs)
Segment-Anything + 3D. Let's lift anything to 3D.
An iterative magnetic susceptibility sources separation method
Apptainer: Application containers for Linux
MRI phase combination algorithms for array-coils
An experimental open-source attempt to make GPT-4 fully autonomous.
Accelerated Variational dynamic MRI reconstruction
This toolbox was designed with the purpose of correcting for B1 inhomogeneities inherent of transmit-receive (transceive) surface RF coils used in magnetic resonance imaging.
BART: Toolbox for Computational Magnetic Resonance Imaging
Landing page for BART Webinars
Material for BART demos.
Python wrappers for external BART computational imaging tools and internal libraries
Brainchop: In-browser 3D MRI rendering and segmentation
A re-implementation of FSL's Brain Extraction Tool in Python
BrkRaw: A comprehensive tool to access raw Bruker Biospin MRI data
BART Toolbox integration for Brkraw
BrkRaw Snippets: Modular Extensions for BrkRaw
Repository of the BrkRaw Python API tutorials with the Jupyter Notebook
Convert Pulseq files to Bruker sequences
A Python package providing I/O interface for Bruker data sets
utilities for dealing with bruker nmr/mri systems and data
ChatGPT (Do this for me!)
Code for magnetic susceptibility source separation
Painless conjugate gradient notebooks
Python electromagnetic cosimulation library
Run macOS VM in a Docker! Run near native OSX-KVM in Docker! X11 Forwarding! CI/CD for OS X Security Research! Docker mac Containers.
Extended phase graph (EPG) simulation in Python