zhangrengang / ogap Goto Github PK

OGAP.py Arabidopsis_thaliana-mt.gb -mt -o mt_out
Traceback (most recent call last):
File "/g/data/nm31/bin/OGAP/OGAP.py", line 7, in
from itertools import izip, combinations
ImportError: cannot import name 'izip' from 'itertools' (unknown location)

I ran pip install Genbank with no errors but still get:

OGAP.py Arabidopsis_thaliana-mt.gb -mt -o mt_out
Traceback (most recent call last):
File "/g/data/nm31/bin/OGAP/OGAP.py", line 11, in
from lib.Database import Database
File "/g/data/nm31/bin/OGAP/lib/Database.py", line 14, in
from Genbank import GenbankParser, format_taxon
ModuleNotFoundError: No module named 'Genbank'