Won Cheol Yim's Projects
Nextflow workflow for automatic repeat detection, classification and masking
Nextflow ChIP-seq data analysis pipeline, National Genomics Infrastructure, Science for Life Laboratory in Stockholm
Methylation (Bisulfite-Sequencing) Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.
By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline
Analysis Framework for Biological Data from High Throughput Experiments
Application for NSF Post-doc fellowship
Useful bash one-liners for bioinformatics.
Accurate inference of orthologous gene groups made easy. "OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthologous gene group inference accuracy"
Creates Venn diagrams for OrthoMCL output
Package dependency, build and installation instructions for use with the Alces Clusterware gridware tool
PASA software
A swiss-army knife for interrogating PacBio® HDF5 files (cmp.h5, bas.h5)
All the misc. perl scripts
:evergreen_tree: Annotate the mitochondrial genome of white spruce (Picea glauca)
NSF PGRP 2015 highland adaptation
Pretty heatmaps
(Mostly) Perl scripts that do something related to phylogenomic analysis.
Run pilon until it converges
A pipeline for isoseq
Pipelines for ChIP-seq analysis, such as peak calling, differential enrichment detection, and pausing index calculation for PolII.
Workshops presented by the Gladstone Bioinformatics Core
Plant GWA (genome-wide analysis), GEP (genomic-enable prediction) and GE (genome evolution) toolset
SNP/Genotype calling based on ANGSD && downstream analyses
[WIP] Download full text pdf and supplemental materials for each PubMed IDs.
Batch download with medline description
React
Typescript
Django
Laravel
Facebook
Microsoft
Google
Alibaba
D3
Tencent