Won Cheol Yim's Projects
snakemake
Helpful commands to play with SLURM on manitou, superdome, valeria...
Intervene: a tool for intersection and visualization of multiple genomic region and gene sets
scripts to parse IrysView output
User Documentation
Python utility libraries on genome assembly, annotation and comparative genomics
Collection of third-party softwares used in jcvi library
A directory of the best-looking themes for Jekyll blogs
KeyCastr, an open-source keystroke visualizer
The LACHESIS software, as described in Nature Biotechnology (http://dx.doi.org/10.1038/nbt.2727)
Calculates Leaf area from scanned leaf images
DEPRECATED: please use https://github.com/carpentries/lesson-example instead
For TEClass
Long Interval Nucleotide K-mer Scaffolder
Lollipop-style mutation diagrams for annotating genetic variations.
Manhattan plot Generator
An open registry of Marchantia polymorpha genetic parts
Maurice's Portfolio
Command-line program to wrap dagchainer and combine pairwise results into multi-alignments in column format
MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!
Collection of meeting materials and contents
A versatile pairwise aligner for genomic and spliced nucleotide sequences
A pipeline to identify causal mutations in EMS mutant
Error correction for Oxford Nanopore data
Collaboration between Austin and Debbie