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Some thing interesting about cobrapy
Some thing interesting about cobrapy
cobrapy,Python package and workflow for EFM calculation via (mp)lrs and efmtool
User: beeanka
cobrapy,COBRApy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Organization: biosimulators
Home Page: https://docs.biosimulators.org/Biosimulators_COBRApy
cobrapy,Multivariate thermodynamics-based metabolic flux analysis in Python.
Organization: biosustain
cobrapy,ECMproject is a standalone python program, which enumerates Elementary Conversion Modes (ECMs) of metabolic models.
User: c-mayer
cobrapy,Adjusting for false discoveries in constraint- and sampling-based differential metabolic flux analysis
Organization: compbtbs
cobrapy,Proyecto para las redes metabolicas humanas.
Organization: deependata
cobrapy,Repositório para apresentação de código e posterior análise, desenvolvido pelo grupo 1 para a UC Biologia de Sistemas, do Mestraddo em Bioinformática, ano lectivo 23-24.
User: duartebred
Home Page: https://github.com/duartebred/fba-Flux-Balance-Analysis
cobrapy,Utility to simplify obtaining information from genome-scale models as well as their manipulation. This implementation is available only for working with COBRApy.
User: earmingol
cobrapy,Computational Biology Techniques 2, Glucose Pathway
User: elshaymaaahmed
cobrapy,Pathways That Harvest Chemical Reactions
User: elshaymaaahmed
cobrapy,findCP CLI package - find ChokePoint reactions in genome-scale metabolic models
Organization: findcp
Home Page: https://findcpcli.readthedocs.io/en/latest/
cobrapy,findCP core package - find ChokePoint reactions in genome-scale metabolic models
Organization: findcp
Home Page: https://findcpcore.readthedocs.io/en/latest/
cobrapy, iPfal17 genome-scale metabolic reconstruction; lipid metabolism curation
Organization: gulermalaria
cobrapy,Repository of code and information developed for computational biology research at UGA
User: jackmeersman
cobrapy,StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy
Organization: klamt-lab
cobrapy,diversity-based enumeration of optimal context-specific metabolic networks using the cobrapy library
Organization: metexplore
Home Page: https://forgemia.inra.fr/metexplore/cbm/dexom-python
cobrapy,Constraint-based modeling of metabolism using Mixed Integer Optimization
Organization: metexplore
Home Page: https://metexplore.github.io/miom
cobrapy,Python package to study microbial communities using metabolic modeling.
Organization: micom-dev
Home Page: https://micom-dev.github.io/micom
cobrapy,Reaction Inclusion by Parsimony and Transcript Distribution
User: mjenior
cobrapy,Constraint-based model vulnerabilities analysis - Python analysis tool http://contrabass.unizar.es
Organization: opencontrabass
Home Page: https://contrabass.readthedocs.io
cobrapy,A class based on COBRApy to handle quantitative mutations on metabolic models.
User: pyubero
cobrapy,Docker image for a full ME model stack.
Organization: resendislab
cobrapy,An implementation of genome-scale model reconstruction using Cost Optimization Reaction Dependency Assessment by Schultz et. al
Organization: resendislab
Home Page: http://resendislab.github.io/corda
cobrapy,A COBRApy extension for genome-scale models of metabolism and expression (ME-models)
Organization: sbrg
cobrapy,Data and tools necessary to construct iJL1678b-ME, a genome-scale model of E. coli K-12 MG1655 metabolism and expression
Organization: sbrg
cobrapy,A Python framework for structural systems biology
Organization: sbrg
Home Page: http://ssbio.readthedocs.io/en/latest/
cobrapy,Shiny app for visualization of the toy GENREs
User: stolarczyk
Home Page: https://stolarczyk.github.io/metaboLITE/
cobrapy,Multi-scale model of Metabolism In Cellular Systems
User: tracykuper
cobrapy,Bioinformatics project analyzing cancer metabolism using computational modeling and analysis. The project was awarded the GIDI-UP: Summer Research Award and includes data, models, and scripts.
User: vjz3qz
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