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snapvector

windows apps that opens SnapGene Viewer files, sequencing results, and fasta files and import to VectorNTI database in demo mode.

soc_database

Software to load and process the RGB-D Stereo Object Category (SOC) database in the Point Cloud Library (PCL) and Matlab. Database published in: M. Madry et al."From object categories to grasp transfer using probabilistic reasoning". In ICRA, 2012 (http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6225052&tag=1). Software developed by Marianna Madry ([email protected])

sorry

在线制作`sorry 为所欲为`的gif

sortomato

The Sortomato is a utility for sorting Surpass objects into new objects based on their statistical properties. The Sortomato works with Spots and Surfaces objects. If the objects have custom statistical properties, they can also be used to sort the objects.

source-code-from-tutorials

Here is the source code from all of my tutorials.

spaln

Genome mapping and spliced alignment of cDNA or amino acid sequences

spikesort

Fast, powerful spike sorting of extracellular neuron recordings. 99.5% accuracy.

spiketoolbox

A Matlab toolbox for creating and manipulating spike trains, and for stimulating neuromorphic hardware.

spinedetectionandextraction

Segments, detects and extracts dendritic spines from 3d images.

spines

Dendritic Spine Analysis Software

spktools

splicefamalign

spreadsheets-plot

Contains scripts to help generate better visualizations for 3D/4D microscopy statistics from Imaris

sqlite3-matlab

Matlab wrappers for SQLite3's C API

stardist

StarDist - Object Detection with Star-convex Shapes

stardist-imagej

StarDist plugin for ImageJ

stemcelltracker

Tool to Segment and Track Stem Cells in 3D

stitcher

Simple command line tool using OpenCV to stitch images together as a panorama image.

stitching

Fiji's Stitching plugins reconstruct big images from tiled input images.

subsync

Subtitle Speech Synchronizer

superbar

Better bar charts for MATLAB.

surface2surfacedists_nneighbors

Surface2SurfaceDists_NNeighbors is an Imaris extension that calculates the distances from every surface within a Surface object (reference surface) to every surface within a different Surface Object (target surface). Additionally, this extension finds the number of nearest neighbor target surfaces from a reference surface within a user specified search radius (um). The output results are saved to an excel spreadsheet. If the data set has time points, each time point is saved as an additional Sheet in Excel. 

teatime

Change a file's creation, last access and last write time

template-building

Scripts and code relating to building anatomical templates.

terastitcher

A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images

the-art-of-linear-algebra

Graphic notes on Gilbert Strang's "Linear Algebra for Everyone"

tifffolder

Easily parse/access a subset of data from a folder of TIFFs

time_changer

script that changes file times

tmrpcm

Arduino library for asynchronous playback of PCM/WAV files direct from SD card. Arduino Uno,Nano,Mega etc supported

tnscui2020

3 Steps achieve SOTA in MICCAI 2020 Thyroid Nodule Segmentation Challenge