Minor Variant Calling and Phasing Tools

Latest version can be installed via bioconda package minorseq.

Please refer to our official pbbioconda page for information on Installation, Support, License, Copyright, and Disclaimer.

Overview how to run your sample.

juliet identifies minor variants from aligned ccs reads.

fuse reduces an alignment into its closest representative sequence.

cleric swaps the reference of an alignment by transitive alignment.

julietflow automatizes the minor variant pipeline.

mixdata helps to mix clonal strains in-silico for benchmarking studies.

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