nailouzhang Goto Github PK

crc_scrnaseq

cwgflhgcchap_2021

deeplearning_ai_books

deeplearning.ai（吴恩达老师的深度学习课程笔记及资源）

deepvs

Boosting Docking-Based Virtual Screening with Deep Learning

distiller-nf

A modular Hi-C mapping pipeline

dms_tools2

software for the analysis and visualization of deep mutational scanning data

dms_variants

Analyze deep mutational scanning of barcoded variants.

dmslogo

draw sequence logos tailored to deep mutational scanning (DMS) data

docker-stacks

Ready-to-run Docker images containing Jupyter applications

drugbank_downloader

Don't worry about DrugBank licensing - write code that knows how to download it automatically

drugcell

A visible neural network model for drug response prediction

drugcellnet

Predicting Anticancer Drug Responses Using a Dual-Layer Integrated Cell Line-Drug Network Model

dseqr

single-cell and bulk RNA-seq analyses from counts → pathways → drug candidates.

ectracker

EcTracker: Tracking and elucidating ectopic expression leveraging large scale scRNA-seq studies.

enrichedheatmap

make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.

evoimmunopop_mirnas

Scripts from the manuscript "Population variation of miRNAs and isomiRs and their impact on human immunity to infection"

evoimmunopop_splicing

Scripts from The manuscript "Defining the genetic and evolutionary architecture of alternative splicing in response to infection"

extract_specific_sites_from_msa

To extract some sites (or codon) from a multiple sequence alignment

feature-selection-using-lasso-svm-and-random-forest

flair

Full-Length Alternative Isoform analysis of RNA

free

翻墙、免费翻墙、免费科学上网、免费节点、免费梯子、免费ss/v2ray/trojan节点、蓝灯、谷歌商店、翻墙梯子

funpipe

A python library for building best practice fungal genomic analysis pipeline

fusioncatcher

Finder of Somatic Fusion Genes in RNA-seq data

genoplotr_wrapper

Wrapper for the genoPlotR R package. This wrapper makes phylogeny, genbank files and blast comparisons that is needed for the genoPLotR package

gggenomes

A grammar of graphics for comparative genomics

graphbin

GraphBin: Refined binning of metagenomic contigs using assembly graphs

guidock

hba-deals

HBA-DEALS

hbv_splicing_paper_2020

Quantitative analysis of the spliced variants expressed by the major hepatitis B virus genotypes

hic_paper_ng_2019

Processed data set of Miura et al., Nature Genetics, 2019