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heudiconv

A flexible DICOM converter for organizing brain imaging data into structured directory layouts

icons

Official open source SVG icon library for Bootstrap.

iframe_shiny

test using iframe to embed shinny app from shiny.io

interactions

A comprehensive, user-friendly toolkit for visualizing and analyzing statistical interactions. A spinoff from the `jtools` package.

invoicer

Use R to generate PDF invoices and save income data into csv file

jekyll-asciidoc

:syringe: A Jekyll plugin that converts AsciiDoc source files in your site to HTML pages using Asciidoctor.

markdown-for-scientists

Using Markdown in many contexts in science: creating beautiful documents, systematic notes/README, analysis workflow (Rmarkdown, jupyter notebooks)

misctools

misc tool/scripts that I don't know where to put yet...

mixomics

Master and devel repo for mixOmics on BioC

ml-eeg

Machine learning EEG project for Dallas Brainhack 2019

muellerreport_ca

Correspondence analyses of the Mueller Report

neurohcp

Human Connectome Project Interface with R

open-computational-neuroscience-resources

A publicly-editable collection of open computational neuroscience resources

open-science-resources

A publicly-editable collection of open science resources, including tools, datasets, meta-resources, etc.

practical-ext-of-intro-stats-in-psy-using-r

Practical Extension of Introductory Statistics in Psychology using R

psychopyparadigms

Experimental Paradigms written for PsychoPy

pytheplot

ThePlotFMRI allows to create a figure summarizing a functional data set as Jonathan Power introduced it in 2017. The fMRI data set is assumed to be preprocessed with SPM. The functional file and some pre-processed files are mandatory to run this script. This script performs the plotting only, not the pre-processing.

qc

Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data

r-for-brain-network

Analyze brain surface/volume (gifti, cifti, nifti) in R and extract networks

rand_data

data projects in testing mode

restinginpca

rmarkdown-website-template

Template for creating your website with R markdown.

stats_blog

stop-it

stpy

Stop-signal task in Python

superheat

An r package for generating beautiful and customizable heatmaps (added some options - mychan24)

system-segregation-and-graph-tools

System segregation (see Chan et al. 2014 PNAS) and RSFC brain network tools

website_quarto