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Md Mesbah Uddin

Md Mesbah Uddin's Projects

c-cpp-notes icon c-cpp-notes

Lecture notes and example code for teaching C & C++

caleydo icon caleydo

Caleydo - Visualization for Molecular Biology

ccrhtml icon ccrhtml

A small repo for storing the code for making the files and html for CCRs.

cgppindel icon cgppindel

Cancer Genome Project Insertion/Deletion detection pipeline based around Pindel

cgsi18 icon cgsi18

Scripts for downloading and querying raw Snaptron data

chip-ewas icon chip-ewas

Code used to generate figures and tables in Uddin, M. M. et al. 2022

cmb-roh icon cmb-roh

Detecting autozygosity via runs of homozygosity

cms icon cms

Composite of Multiple Signals: tests for selection in meiotically recombinant populations

cntk icon cntk

Microsoft Cognitive Toolkit (CNTK), an open source deep-learning toolkit

cnvnator icon cnvnator

a tool for CNV discovery and genotyping from depth-of-coverage by mapped reads

coding-exercises icon coding-exercises

My implementation of useful data structures, algorithms, as well as my solutions to programming puzzles.

cpipe icon cpipe

The open source version of the Melbourne Genomics Health Alliance Exome Sequencing Pipeline

cs231n-2017-summary icon cs231n-2017-summary

After watching all the videos of the famous Standford's CS231n course that took place in 2017, i decided to take summary of the whole course to help me to remember and to anyone who would like to know about it. I've skipped some contents in some lectures as it wasn't important to me.

cvxpy icon cvxpy

A Python-embedded modeling language for convex optimization problems.

d3 icon d3

A JavaScript visualization library for HTML and SVG.

dagdata icon dagdata

Some of the data sets for PH525x: Data Analysis for Genomics

danq icon danq

A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences

dat3 icon dat3

General Assembly's Data Science course in Washington, DC

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