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License: BSD 3-Clause "New" or "Revised" License
A conda-smithy repository for glib.
License: BSD 3-Clause "New" or "Revised" License
@conda-forge-admin please rerender
See conda-forge/weasyprint-feedstock#23 and https://gitter.im/conda-forge/conda-forge.github.io?at=60c76d5ed855766185d8862a
Full error:
$ python -c "import weasyprint"
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/Users/shannon/opt/miniconda3/envs/weasyprint/lib/python3.6/site-packages/weasyprint/__init__.py", line 469, in <module>
from .css import preprocess_stylesheet # noqa isort:skip
File "/Users/shannon/opt/miniconda3/envs/weasyprint/lib/python3.6/site-packages/weasyprint/css/__init__.py", line 27, in <module>
from . import computed_values, counters, media_queries
File "/Users/shannon/opt/miniconda3/envs/weasyprint/lib/python3.6/site-packages/weasyprint/css/computed_values.py", line 15, in <module>
from .. import text
File "/Users/shannon/opt/miniconda3/envs/weasyprint/lib/python3.6/site-packages/weasyprint/text.py", line 259, in <module>
'libgobject-2.0.dylib')
File "/Users/shannon/opt/miniconda3/envs/weasyprint/lib/python3.6/site-packages/weasyprint/text.py", line 255, in dlopen
return ffi.dlopen(names[0]) # pragma: no cover
File "/Users/shannon/opt/miniconda3/envs/weasyprint/lib/python3.6/site-packages/cffi/api.py", line 150, in dlopen
lib, function_cache = _make_ffi_library(self, name, flags)
File "/Users/shannon/opt/miniconda3/envs/weasyprint/lib/python3.6/site-packages/cffi/api.py", line 832, in _make_ffi_library
backendlib = _load_backend_lib(backend, libname, flags)
File "/Users/shannon/opt/miniconda3/envs/weasyprint/lib/python3.6/site-packages/cffi/api.py", line 827, in _load_backend_lib
raise OSError(msg)
OSError: cannot load library 'gobject-2.0': dlopen(gobject-2.0, 2): image not found. Additionally, ctypes.util.find_library() did not manage to locate a library called 'gobject-2.0'
@conda-forge-admin, please re-render.
In conda-forge/gobject-introspection-feedstock#72, the Windows builds are failing due to a missing intl.lib
.
Looking into things, it looks like the need for that library is coming from the glib pkg-config files, which include intl.lib
as a requirement:
Libs: -L${libdir} -lglib-2.0 -lintl -liconv
If I'm understanding #167 correctly, the build is currently explicitly not including gettext as a runtime dep on Windows, which would be a pretty straightforward explanation for the error.
@xhochy What's the intended pattern here? Should we be adding gettext as a runtime dep on Windows? Should the Windows pkg-config files not be listing -lintl
?
At conda-forge/r-gdtools-feedstock#17 I had to add glib
to requirements/host
because cairo.pc
has GLib libraries in its Requires.private
listings.
cairo
pulls in libglib
so those libraries are in place, but only glib
holds the pkg-config definitions for them which is why pkg-config --cflags cairo
doesn't work unless one explicitly installs glib
alongside cairo
.
(Apart from r-gdtools
there might be around 40 other recipes affected.)
We don't really have clear cut definitions on how to split packages on conda-forge (and no perfect tooling, i.e., only run_exports
but not "devel" exports) and thus no libglib
/libglib-devel
split (with the latter explicitly for pkg-config and header files).
For other library packages we just ship the -devel
part with the library itself, i.e., libglib
here. Could we do the same here?
Issue:
I am building my application against glib
coming from conda-forge. I stumble upon the following error. glibconfig.h
is not to be found in the environment nor in the package. Is this a bug? If not, could the file be found in other packages?
/home/edo/miniconda3/envs/tnv/include/glib-2.0/glib/gtypes.h:32:10: fatal error: glibconfig.h: No such file or directory
#include <glibconfig.h>
^~~~~~~~~~~~~~
compilation terminated.
conda list
):
$ conda list
# Name Version Build Channel
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 1_llvm conda-forge
bzip2 1.0.8 h516909a_2 conda-forge
ca-certificates 2020.1.1 0
certifi 2019.11.28 py36_1
cmake 3.13.4 h8d4ced6_0 conda-forge
curl 7.68.0 hf8cf82a_0 conda-forge
cython 0.29.16 py36h831f99a_0 conda-forge
expat 2.2.9 he1b5a44_2 conda-forge
gettext 0.19.8.1 hc5be6a0_1002 conda-forge
glib 2.63.1 h5a9c865_0
krb5 1.16.4 h2fd8d38_0 conda-forge
ld_impl_linux-64 2.34 h53a641e_0 conda-forge
libblas 3.8.0 16_openblas conda-forge
libcblas 3.8.0 16_openblas conda-forge
libcurl 7.68.0 hda55be3_0 conda-forge
libedit 3.1.20170329 hf8c457e_1001 conda-forge
libffi 3.2.1 he1b5a44_1007 conda-forge
libgcc-ng 9.2.0 h24d8f2e_2 conda-forge
libgfortran-ng 7.3.0 hdf63c60_5 conda-forge
libiconv 1.15 h516909a_1006 conda-forge
liblapack 3.8.0 16_openblas conda-forge
libopenblas 0.3.9 h5ec1e0e_0 conda-forge
libssh2 1.8.2 h22169c7_2 conda-forge
libstdcxx-ng 9.2.0 hdf63c60_2 conda-forge
libuv 1.34.0 h516909a_0 conda-forge
llvm-openmp 9.0.1 hc9558a2_2 conda-forge
meson 0.54.0 py_0 conda-forge
ncurses 6.1 hf484d3e_1002 conda-forge
ninja 1.10.0 hc9558a2_0 conda-forge
numpy 1.15.4 py36h8b7e671_1002 conda-forge
openssl 1.1.1f h7b6447c_0
pcre 8.44 he1b5a44_0 conda-forge
pip 20.0.2 py_2 conda-forge
python 3.6.10 h9d8adfe_1009_cpython conda-forge
python_abi 3.6 1_cp36m conda-forge
readline 8.0 hf8c457e_0 conda-forge
rhash 1.3.6 h14c3975_1001 conda-forge
ripgrep 12.0.1 h516909a_1 conda-forge
setuptools 46.1.3 py36h9f0ad1d_0 conda-forge
sqlite 3.30.1 hcee41ef_0 conda-forge
tk 8.6.10 hed695b0_0 conda-forge
wheel 0.34.2 py_1 conda-forge
xz 5.2.4 h516909a_1002 conda-forge
zlib 1.2.11 h516909a_1006 conda-forge
conda
and system ( conda info
):
$ conda info
active environment : tnv
active env location : /home/edo/miniconda3/envs/tnv
shell level : 2
user config file : /home/edo/.condarc
populated config files : /home/edo/.condarc
conda version : 4.8.2
conda-build version : 3.18.9
python version : 3.7.3.final.0
virtual packages : __cuda=10.1
__glibc=2.17
base environment : /home/edo/miniconda3 (writable)
channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/free/linux-64
https://repo.anaconda.com/pkgs/free/noarch
https://repo.anaconda.com/pkgs/r/linux-64
https://repo.anaconda.com/pkgs/r/noarch
package cache : /home/edo/miniconda3/pkgs
/home/edo/.conda/pkgs
envs directories : /home/edo/miniconda3/envs
/home/edo/.conda/envs
platform : linux-64
user-agent : conda/4.8.2 requests/2.22.0 CPython/3.7.3 Linux/3.10.0-1062.9.1.el7.x86_64 centos/7.7.1908 glibc/2.17
UID:GID : 1000:1000
netrc file : None
offline mode : False
Binaries linked with glib 2.56.1
and run with glib 2.55.1
lead to
dyld: Library not loaded: @rpath/libglib-2.0.0.dylib
Referenced from: PATH/XXXX
Reason: Incompatible library version: XXXX requires version 5601.0.0 or later, but libglib-2.0.0.dylib provides version 5501.0.0
Issue: When trying to create environments that require glib, I'm getting notifications that it is corrupted. I have removed it and then reinstalled with the same error. Example of the end of the repeated error messages:
CondaVerificationError: The package for glib located at /home/moorepants/miniconda3/pkgs/glib-2.55.0-h464dc38_1
appears to be corrupted. The path 'share/locale/zh_CN/LC_MESSAGES/glib20.mo'
specified in the package manifest cannot be found.
CondaVerificationError: The package for glib located at /home/moorepants/miniconda3/pkgs/glib-2.55.0-h464dc38_1
appears to be corrupted. The path 'share/locale/zh_HK/LC_MESSAGES/glib20.mo'
specified in the package manifest cannot be found.
CondaVerificationError: The package for glib located at /home/moorepants/miniconda3/pkgs/glib-2.55.0-h464dc38_1
appears to be corrupted. The path 'share/locale/zh_TW/LC_MESSAGES/glib20.mo'
specified in the package manifest cannot be found.
ClobberError: This transaction has incompatible packages due to a shared path.
packages: conda-forge::gettext-0.19.8.1-0, defaults::libgcc-ng-7.2.0-hdf63c60_3
path: 'share/info/dir'
conda list
):
$ conda list
moorepants@garuda:skijumpdesign(plotly-serial)$ conda list
# packages in environment at /home/moorepants/miniconda3:
#
# Name Version Build Channel
_license 1.1 py35_1
_nb_ext_conf 0.4.0 py35_1
alabaster 0.7.11 py_3 conda-forge
altair 2.1.0 py_0 conda-forge
ampl-mp 3.1.0 0 conda-forge
anaconda-client 1.6.14 py_0 conda-forge
anaconda-navigator 1.6.4 py35_0
anaconda-project 0.8.2 py_1 conda-forge
apptools 4.4.0 py35_2 conda-forge
argcomplete 1.9.4 py35_0 conda-forge
args 0.1.0 py35_0 conda-forge
asn1crypto 0.24.0 py_1 conda-forge
astroid 1.6.5 py35_0 conda-forge
asttokens 1.1.11 py_0 conda-forge
asv 0.2.1 py35_0 conda-forge
atomicwrites 1.1.5 py35_0 conda-forge
attrs 18.1.0 py_1 conda-forge
automat 0.7.0 py35_0 conda-forge
babel 2.6.0 py_1 conda-forge
backcall 0.1.0 py_0 conda-forge
backports 1.0 py35_1 conda-forge
backports.functools_lru_cache 1.5 py_1 conda-forge
beautifulsoup4 4.6.0 py35_0 conda-forge
bicycleparameters 1.0.0 py_1 conda-forge
bkcharts 0.2 py35_0 conda-forge
blas 1.1 openblas conda-forge
bleach 2.1.3 py_0 conda-forge
blosc 1.14.0 1 conda-forge
bokeh 0.13.0 py35_0 conda-forge
bqplot 0.10.5 py35_0 conda-forge
bzip2 1.0.6 1 conda-forge
ca-certificates 2018.4.16 0 conda-forge
cairo 1.14.10 0 conda-forge
certifi 2018.4.16 py35_0 conda-forge
cffi 1.11.5 py35_0 conda-forge
chardet 3.0.4 py35_2 conda-forge
chest 0.2.3 py35_0 conda-forge
chrpath 0.16 0 conda-forge
click 6.7 py_1 conda-forge
clint 0.5.1 py_1 conda-forge
cloog 0.18.0 0
cloudpickle 0.5.3 py_0 conda-forge
clyent 1.2.2 py_1 conda-forge
colorama 0.3.9 py_1 conda-forge
conda 4.5.8 py35_1 conda-forge
conda-build 3.11.0 py35_0 conda-forge
conda-build-all 1.1.3 py_0 conda-forge
conda-env 2.6.0 0 conda-forge
conda-forge-pinning 2018.07.24 0 conda-forge
conda-manager 0.4.0 py35_0
conda-smithy 3.1.8 py_0 conda-forge
conda-verify 2.0.0 py35_0 conda-forge
configobj 5.0.6 py35_0
constantly 15.1.0 py_0 conda-forge
coverage 4.5.1 py35_0 conda-forge
cryptography 2.2.1 py35_0 conda-forge
curl 7.60.0 0 conda-forge
cycler 0.10.0 py_1 conda-forge
cyipopt 0.1.7 py35_2 conda-forge
cython 0.28.3 py35_0 conda-forge
cytoolz 0.9.0.1 py35_0 conda-forge
dash 0.21.1 py_1 conda-forge
dash-core-components 0.26.0 py_0 conda-forge
dash-html-components 0.11.0 py_0 conda-forge
dash-renderer 0.13.0 py_0 conda-forge
dask 0.18.2 py_0 conda-forge
dask-core 0.18.2 py_0 conda-forge
dbus 1.11.0 0 conda-forge
decorator 4.3.0 py_0 conda-forge
depfinder 2.1 py_1 conda-forge
dill 0.2.8.2 py35_0 conda-forge
distributed 1.22.0 py35_0 conda-forge
doctr 1.7.3 py35_0 conda-forge
docutils 0.14 py35_0 conda-forge
dynamicisttoolkit 0.5.3 py_1 conda-forge
entrypoints 0.2.3 py35_1 conda-forge
envisage 4.5.1 py_1 conda-forge
expat 2.2.5 0 conda-forge
fastcache 1.0.2 py35_0 conda-forge
filelock 3.0.4 py_1 conda-forge
filterpy 1.4.1 py_1 conda-forge
flake8 3.5.0 py35_0 conda-forge
flake8-import-order 0.18 py_0 conda-forge
flake8-polyfill 1.0.2 py_0 conda-forge
flask 1.0.2 py_1 conda-forge
flask-compress 1.4.0 py_0 conda-forge
fontconfig 2.12.6 0 conda-forge
freeglut 3.0.0 4 conda-forge
freetype 2.8.1 0 conda-forge
future 0.16.0 py35_2 conda-forge
gcc 4.8.5 7
get_terminal_size 1.0.0 py35_0
gettext 0.19.8.1 0 conda-forge
gitdb 0.6.4 py35_2 conda-forge
gitdb2 2.0.4 py_0 conda-forge
gitpython 2.1.11 py_0 conda-forge
glib 2.55.0 0 conda-forge
glob2 0.6 py_0 conda-forge
gmp 6.1.2 0 conda-forge
gmpy2 2.0.8 py35_1 conda-forge
graphite2 1.3.11 0 conda-forge
gsl 2.4 blas_openblas_0 [blas_openblas] conda-forge
gst-plugins-base 1.8.0 0 conda-forge
gstreamer 1.8.0 1 conda-forge
harfbuzz 1.7.6 0 conda-forge
hdf4 4.2.13 0 conda-forge
hdf5 1.10.1 2 conda-forge
heapdict 1.0.0 py35_0 conda-forge
html5lib 1.0.1 py_0 conda-forge
hyperlink 17.3.1 py_0 conda-forge
icu 58.2 0 conda-forge
idna 2.7 py35_2 conda-forge
imageio 2.3.0 py_1 conda-forge
imagesize 1.0.0 py_1 conda-forge
incremental 17.5.0 py_0 conda-forge
ipopt 3.12.10 blas_openblas_0 [blas_openblas] conda-forge
ipydatawidgets 3.1.0 py_1 conda-forge
ipykernel 4.8.2 py35_0 conda-forge
ipyscales 0.2.2 py_0 conda-forge
ipython 6.4.0 py35_0 conda-forge
ipython-notebook 4.0.4 py35_0
ipython_genutils 0.2.0 py_1 conda-forge
ipywidgets 7.3.1 py_0 conda-forge
isl 0.12.2 0
isort 4.3.4 py35_0 conda-forge
itsdangerous 0.24 py_2 conda-forge
jbig 2.1 0 conda-forge
jedi 0.12.1 py35_0 conda-forge
jeepney 0.3.1 py_0 conda-forge
jinja2 2.10 py_1 conda-forge
jpeg 9b 2 conda-forge
jsoncpp 1.8.1 0 conda-forge
jsonschema 2.6.0 py35_1 conda-forge
jupyter 1.0.0 py_1 conda-forge
jupyter_client 5.2.3 py_1 conda-forge
jupyter_console 5.2.0 py35_0 conda-forge
jupyter_contrib_core 0.3.3 py_2 conda-forge
jupyter_contrib_nbextensions 0.5.0 py35_0 conda-forge
jupyter_core 4.4.0 py_0 conda-forge
jupyter_highlight_selected_word 0.2.0 py35_0 conda-forge
jupyter_latex_envs 1.4.4 py35_0 conda-forge
jupyter_nbextensions_configurator 0.4.0 py35_0 conda-forge
jupyterlab 0.33.1 py35_0 conda-forge
jupyterlab_launcher 0.11.2 py_0 conda-forge
keyring 13.2.1 py35_0 conda-forge
kiwisolver 1.0.1 py35_1 conda-forge
krb5 1.14.6 0 conda-forge
lazy-object-proxy 1.3.1 py35_0 conda-forge
libffi 3.2.1 3 conda-forge
libgcc 5.2.0 0
libgfortran 3.0.0 1
libglu 9.0.0 0 conda-forge
libgpuarray 0.7.6 0 conda-forge
libiconv 1.15 0 conda-forge
libnetcdf 4.6.1 2 conda-forge
libogg 1.3.2 0 conda-forge
libpng 1.6.34 0 conda-forge
libsodium 1.0.16 0 conda-forge
libssh2 1.8.0 2 conda-forge
libtheora 1.1.1 0 conda-forge
libtiff 4.0.9 0 conda-forge
libuuid 1.0.3 1 conda-forge
libvorbis 1.3.5 0 conda-forge
libxcb 1.13 0 conda-forge
libxml2 2.9.8 0 conda-forge
libxslt 1.1.32 0 conda-forge
llvm 3.3 0
llvmlite 0.23.0 py35_1 conda-forge
locket 0.2.0 py_2 conda-forge
lxml 4.2.2 py35_0 conda-forge
lz4-c 1.8.2 0 conda-forge
lzo 2.10 0 conda-forge
mako 1.0.7 py_1 conda-forge
markupsafe 1.0 py35_0 conda-forge
mathjax 2.2 py35_0
matplotlib 2.2.2 py35_1 conda-forge
mccabe 0.6.1 py_1 conda-forge
mesa 10.5.4 0
metis 5.1.0 3 conda-forge
mistune 0.8.3 py35_1 conda-forge
mkl 2017.0.3 0
mkl-service 1.1.2 py35_3
mock 2.0.0 py35_0 conda-forge
more-itertools 4.2.0 py35_1 conda-forge
mpc 1.1.0 4 conda-forge
mpfr 3.1.5 0 conda-forge
mpi 1.0 mpich conda-forge
mpich 3.2.1 1 conda-forge
mpld3 0.3 py_1 conda-forge
mpmath 1.0.0 py_0 conda-forge
msgpack-python 0.5.6 py35_1 conda-forge
mumps 5.0.2 blas_openblash90229ac_210 [blas_openblas] conda-forge
nb_anacondacloud 1.4.0 py35_0 conda-forge
nb_conda 2.2.1 py35_0 conda-forge
nb_conda_kernels 2.1.1 py35_1 conda-forge
nbconvert 5.3.1 py_1 conda-forge
nbdime 1.0.1 py35_0 conda-forge
nbformat 4.4.0 py_1 conda-forge
nbpresent 3.0.2 py35_1 conda-forge
ncurses 5.9 10 conda-forge
networkx 2.1 py_1 conda-forge
nose 1.3.7 py35_2 conda-forge
notebook 5.6.0 py35_0 conda-forge
numba 0.38.1 py35_0 conda-forge
numexpr 2.6.5 py35_0 conda-forge
numpy 1.14.5 py35_blas_openblash24bf2e0_200 [blas_openblas] conda-forge
numpydoc 0.8.0 py_1 conda-forge
olefile 0.45.1 py_1 conda-forge
openblas 0.2.20 8 conda-forge
openssl 1.0.2o 0 conda-forge
packaging 17.1 py_0 conda-forge
pandas 0.23.3 py35_0 conda-forge
pandoc 2.2.2 1 conda-forge
pandocfilters 1.4.2 py_1 conda-forge
pango 1.40.14 0 conda-forge
parso 0.3.1 py_0 conda-forge
partd 0.3.8 py_1 conda-forge
patchelf 0.9 2 conda-forge
path.py 11.0.1 py_0 conda-forge
patsy 0.5.0 py_1 conda-forge
pbr 4.2.0 py_0 conda-forge
pcre 8.41 1 conda-forge
pep8 1.7.1 py_0 conda-forge
pep8-naming 0.7.0 py_0 conda-forge
pexpect 4.6.0 py35_0 conda-forge
pickleshare 0.7.4 py35_0 conda-forge
pillow 5.2.0 py35_0 conda-forge
pint 0.8.1 py_1 conda-forge
pip 18.0 py35_0 conda-forge
pixman 0.34.0 2 conda-forge
pkginfo 1.4.2 py_1 conda-forge
plotly 3.1.0 py_0 conda-forge
pluggy 0.6.0 py_0 conda-forge
ply 3.11 py_1 conda-forge
prometheus_client 0.3.0 py_0 conda-forge
prompt_toolkit 1.0.15 py35_0 conda-forge
psutil 5.4.6 py35_0 conda-forge
ptscotch 6.0.5 ha5050ec_0 conda-forge
ptyprocess 0.6.0 py35_0 conda-forge
py 1.5.4 py_0 conda-forge
pyasn1 0.4.3 py_0 conda-forge
pycodestyle 2.3.1 py35_0 conda-forge
pycosat 0.6.3 py35_0 conda-forge
pycparser 2.18 py_1 conda-forge
pycrypto 2.6.1 py35_1 conda-forge
pydy 0.4.0 py35_0 conda-forge
pyface 6.0.0 py_1 conda-forge
pyflakes 1.6.0 py35_0 conda-forge
pygithub 1.39 py35_0 conda-forge
pygments 2.2.0 py_1 conda-forge
pygpu 0.7.6 py35_0 conda-forge
pyinstrument 0.13.1 <pip>
pyinstrument 2.0.3 py_0 conda-forge
pyinstrument_cext 0.1.2 py35_0 conda-forge
pyjwt 1.6.4 py_0 conda-forge
pylint 1.9.2 py35_0 conda-forge
pyopenssl 18.0.0 py35_0 conda-forge
pyparsing 2.2.0 py_1 conda-forge
pyqt 5.6.0 py35_5 conda-forge
pyserial 3.4 py35_0 conda-forge
pysocks 1.6.8 py35_1 conda-forge
pytables 3.4.4 py35_8 conda-forge
pytest 3.6.3 py35_0 conda-forge
python 3.5.5 1 conda-forge
python-dateutil 2.7.3 py_0 conda-forge
python-symengine 0.3.0 py35_0 conda-forge
pythreejs 1.1.0 py35_2 conda-forge
pytz 2018.5 py_0 conda-forge
pywavelets 0.5.2 py35_1 conda-forge
pyyaml 3.12 py35_1 conda-forge
pyzmq 17.0.0 py35_4 conda-forge
qt 5.6.2 7 conda-forge
qtawesome 0.4.4 pyh8a2030e_1 conda-forge
qtconsole 4.3.1 py35_0 conda-forge
qtpy 1.4.2 pyh8a2030e_1 conda-forge
quantities 0.12.2 pyh24bf2e0_0 conda-forge
readline 7.0 0 conda-forge
requests 2.19.1 py35_1 conda-forge
requests-toolbelt 0.8.0 py_1 conda-forge
resonance 0.19.1 py35_0 conda-forge
retrying 1.3.3 py_2 conda-forge
rope 0.10.7 py_1 conda-forge
ruamel.yaml 0.15.45 py35_0 conda-forge
ruamel_yaml 0.15.35 py35_0 conda-forge
ruby 2.4.4 0 conda-forge
scalapack 2.0.2 ha5050ec_2 conda-forge
scikit-image 0.14.0 py35_0 conda-forge
scikit-learn 0.19.2 py35_blas_openblas_200 [blas_openblas] conda-forge
scipy 1.1.0 py35_blas_openblas_200 [blas_openblas] conda-forge
scotch 6.0.5 0 conda-forge
seaborn 0.9.0 py_0 conda-forge
secretstorage 3.0.1 py35_0 conda-forge
send2trash 1.5.0 py_0 conda-forge
setproctitle 1.1.10 py35_0 conda-forge
setuptools 40.0.0 py35_0 conda-forge
simplegeneric 0.8.1 py_1 conda-forge
sip 4.18 py35_1 conda-forge
six 1.11.0 py35_1 conda-forge
skijumpdesign 1.2.0 py_1 conda-forge
slycot 0.3.0 py35_blas_openblas_201 [blas_openblas] conda-forge
smmap 0.9.0 py_2 conda-forge
smmap2 2.0.4 py_0 conda-forge
snakeviz 0.4.1 py35_0
snowballstemmer 1.2.1 py_1 conda-forge
sortedcontainers 2.0.4 py_1 conda-forge
sphinx 1.7.5 py35_0 conda-forge
sphinx_rtd_theme 0.4.1 py_0 conda-forge
sphinxcontrib 1.0 py35_0
sphinxcontrib-websupport 1.0.1 py35_0 conda-forge
spyder 3.2.8 py35_0 conda-forge
spyder-kernels 1.0.1 py_1 conda-forge
spyder-notebook 0.1.2 py35_0 conda-forge
sqlite 3.20.1 2 conda-forge
statsmodels 0.9.0 py35_0 conda-forge
stdlib-list 0.4.0 py35_0 conda-forge
symengine 0.3.0 1 conda-forge
sympy 1.2 py35_0 conda-forge
system 5.8 2
tbb 2018_20171205 0 conda-forge
tblib 1.3.2 py_1 conda-forge
terminado 0.8.1 py35_0 conda-forge
testpath 0.3.1 py35_0 conda-forge
theano 1.0.2 py35_0 conda-forge
tk 8.6.8 0 conda-forge
toolz 0.9.0 py_0 conda-forge
tornado 5.1 py35_0 conda-forge
tqdm 4.24.0 py_0 conda-forge
traitlets 4.3.2 py35_0 conda-forge
traits 4.6.0 py35_1 conda-forge
traitsui 6.0.0 py_1 conda-forge
traittypes 0.2.1 py_1 conda-forge
twine 1.11.0 py_1 conda-forge
twisted 17.5.0 py35_0
typing 3.6.4 py35_2 conda-forge
uncertainties 3.0.2 py35_1 conda-forge
urllib3 1.23 py35_0 conda-forge
vega 1.3.0 py35_0 conda-forge
vtk 8.1.0 py35h3f2a929_203 conda-forge
wcwidth 0.1.7 py_1 conda-forge
webencodings 0.5 py35_0 conda-forge
werkzeug 0.14.1 py_0 conda-forge
wheel 0.31.1 py35_0 conda-forge
widgetsnbextension 3.3.1 py35_0 conda-forge
wrapt 1.10.11 py35_0 conda-forge
wxpython 4.0.1 py35_0 conda-forge
xlrd 1.1.0 py_2 conda-forge
xonsh 0.7.1 py35_0 conda-forge
xorg-kbproto 1.0.7 1 conda-forge
xorg-libice 1.0.9 2 conda-forge
xorg-libsm 1.2.2 2 conda-forge
xorg-libx11 1.6.5 0 conda-forge
xorg-libxau 1.0.8 3 conda-forge
xorg-libxdmcp 1.1.2 3 conda-forge
xorg-libxext 1.3.3 2 conda-forge
xorg-libxrender 0.9.10 0 conda-forge
xorg-libxt 1.1.5 0 conda-forge
xorg-renderproto 0.11.1 1 conda-forge
xorg-xextproto 7.3.0 1 conda-forge
xorg-xproto 7.0.31 6 conda-forge
xz 5.2.3 0 conda-forge
yaml 0.1.7 0 conda-forge
yeadon 1.3.0 py35_1 conda-forge
youtube-dl 2016.10.26 <pip>
zeromq 4.2.5 2 conda-forge
zict 0.1.3 py_0 conda-forge
zlib 1.2.11 0 conda-forge
zope 1.0 py35_0
zope.interface 4.4.2 py35_0
conda
and system ( conda info
):
$ conda info
moorepants@garuda:skijumpdesign(plotly-serial)$ conda info
active environment : None
user config file : /home/moorepants/.condarc
populated config files : /home/moorepants/.condarc
conda version : 4.5.8
conda-build version : 3.11.0
python version : 3.5.5.final.0
base environment : /home/moorepants/miniconda3 (writable)
channel URLs : https://conda.anaconda.org/conda-forge/linux-64
https://conda.anaconda.org/conda-forge/noarch
http://repo.continuum.io/pkgs/free/linux-64
http://repo.continuum.io/pkgs/free/noarch
https://conda.anaconda.org/pydy/linux-64
https://conda.anaconda.org/pydy/noarch
https://conda.anaconda.org/moorepants/linux-64
https://conda.anaconda.org/moorepants/noarch
package cache : /home/moorepants/miniconda3/pkgs
/home/moorepants/.conda/pkgs
envs directories : /home/moorepants/miniconda3/envs
/home/moorepants/.conda/envs
platform : linux-64
user-agent : conda/4.5.8 requests/2.19.1 CPython/3.5.5 Linux/4.15.0-29-generic ubuntu/18.04 glibc/2.27
UID:GID : 1000:1000
netrc file : /home/moorepants/.netrc
offline mode : False
I was unsure to open the issue here or in gdk-pixbuf. Since libglib=2.78.4=h55e6270_1
, on Windows gdk-pixbuf-query-loaders fails with an error related to a missing libintl_bindtextdomain
symbol. To reproduce, just create an environment with mamba create -n gdk-pixbuf-test gdk-pixbuf
and run there gdk-pixbuf-query-loaders
. The problem is solved when libglib=2.78.4=*_0
is installed.
Log to reproduce the issue:
C:\Users\straversaro>mamba create -n gdk-pixbuf-test gdk-pixbuf
Looking for: ['gdk-pixbuf']
conda-forge/win-64 Using cache
conda-forge/noarch Using cache
robostack-staging/win-64 No change
robostack-staging/noarch No change
Transaction
Prefix: C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test
Updating specs:
- gdk-pixbuf
Package Version Build Channel Size
-----------------------------------------------------------------------
Install:
-----------------------------------------------------------------------
+ ucrt 10.0.22621.0 h57928b3_0 conda-forge Cached
+ vc14_runtime 14.38.33130 h82b7239_18 conda-forge Cached
+ vs2015_runtime 14.38.33130 hcb4865c_18 conda-forge Cached
+ vc 14.3 hcf57466_18 conda-forge Cached
+ libiconv 1.17 hcfcfb64_2 conda-forge Cached
+ libffi 3.4.2 h8ffe710_5 conda-forge Cached
+ bzip2 1.0.8 hcfcfb64_5 conda-forge Cached
+ libdeflate 1.19 hcfcfb64_0 conda-forge Cached
+ xz 5.2.6 h8d14728_0 conda-forge Cached
+ lerc 4.0.0 h63175ca_0 conda-forge Cached
+ libjpeg-turbo 3.0.0 hcfcfb64_1 conda-forge Cached
+ libzlib 1.2.13 hcfcfb64_5 conda-forge Cached
+ libpng 1.6.43 h19919ed_0 conda-forge Cached
+ zstd 1.5.5 h12be248_0 conda-forge Cached
+ pcre2 10.42 h17e33f8_0 conda-forge Cached
+ libtiff 4.6.0 h6e2ebb7_2 conda-forge Cached
+ libglib 2.78.4 h55e6270_1 conda-forge Cached
+ gdk-pixbuf 2.42.10 h90a7034_4 conda-forge Cached
Summary:
Install: 18 packages
Total download: 0 B
-----------------------------------------------------------------------
Confirm changes: [Y/n] y
Downloading and Extracting Packages:
Preparing transaction: done
Verifying transaction: done
Executing transaction: - g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\.g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2..g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2..g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2..g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2..g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2..g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2..g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2..g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2..g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2..g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2..
done
To activate this environment, use
$ mamba activate gdk-pixbuf-test
To deactivate an active environment, use
$ mamba deactivate
C:\Users\straversaro>mamba create -n gdk-pixbuf-test gdk-pixbuf
C:\Users\straversaro>mamba activate gdk-pixbuf-test
(gdk-pixbuf-test) C:\Users\straversaro>gdk-pixbuf-query-loaders
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-ani.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-ani.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-bmp.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-bmp.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-gif.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-gif.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-icns.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-icns.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-ico.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-ico.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-pnm.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-pnm.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-qtif.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-qtif.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-tga.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-tga.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-tiff.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-tiff.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-xbm.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-xbm.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-xpm.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-xpm.dll': The specified procedure could not be found.
# GdkPixbuf Image Loader Modules file
# Automatically generated file, do not edit
# Created by gdk-pixbuf-query-loaders from gdk-pixbuf-2.42.10
#
# LoaderDir = C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders
#
(gdk-pixbuf-test) C:\Users\straversaro>gdk-pixbuf-query-loaders
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-ani.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-ani.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-bmp.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-bmp.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-gif.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-gif.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-icns.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-icns.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-ico.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-ico.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-pnm.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-pnm.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-qtif.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-qtif.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-tga.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-tga.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-tiff.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-tiff.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-xbm.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-xbm.dll': The specified procedure could not be found.
g_module_open() failed for C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-xpm.dll: 'C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders\pixbufloader-xpm.dll': The specified procedure could not be found.
# GdkPixbuf Image Loader Modules file
# Automatically generated file, do not edit
# Created by gdk-pixbuf-query-loaders from gdk-pixbuf-2.42.10
#
# LoaderDir = C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders
#
(gdk-pixbuf-test) C:\Users\straversaro>mamba create -n gdk-pixbuf-test gdk-pixbuf
(gdk-pixbuf-test) C:\Users\straversaro>mamba install libglib=2.
(gdk-pixbuf-test) C:\Users\straversaro>mamba list
# packages in environment at C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test:
#
# Name Version Build Channel
bzip2 1.0.8 hcfcfb64_5 conda-forge
gdk-pixbuf 2.42.10 h90a7034_4 conda-forge
lerc 4.0.0 h63175ca_0 conda-forge
libdeflate 1.19 hcfcfb64_0 conda-forge
libffi 3.4.2 h8ffe710_5 conda-forge
libglib 2.78.4 h55e6270_1 conda-forge
libiconv 1.17 hcfcfb64_2 conda-forge
libjpeg-turbo 3.0.0 hcfcfb64_1 conda-forge
libpng 1.6.43 h19919ed_0 conda-forge
libtiff 4.6.0 h6e2ebb7_2 conda-forge
libzlib 1.2.13 hcfcfb64_5 conda-forge
pcre2 10.42 h17e33f8_0 conda-forge
ucrt 10.0.22621.0 h57928b3_0 conda-forge
vc 14.3 hcf57466_18 conda-forge
vc14_runtime 14.38.33130 h82b7239_18 conda-forge
vs2015_runtime 14.38.33130 hcb4865c_18 conda-forge
xz 5.2.6 h8d14728_0 conda-forge
zstd 1.5.5 h12be248_0 conda-forge
(gdk-pixbuf-test) C:\Users\straversaro>mamba install libglib=2.78.4=*_0
Looking for: ['libglib==2.78.4[build=*_0]']
conda-forge/win-64 Using cache
conda-forge/noarch Using cache
robostack-staging/win-64 No change
robostack-staging/noarch No change
Transaction
Prefix: C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test
Updating specs:
- libglib==2.78.4[build=*_0]
Package Version Build Channel Size
----------------------------------------------------------
Install:
----------------------------------------------------------
+ gettext 0.21.1 h5728263_0 conda-forge Cached
Change:
----------------------------------------------------------
- libglib 2.78.4 h55e6270_1 conda-forge Cached
+ libglib 2.78.4 h16e383f_0 conda-forge Cached
Summary:
Install: 1 packages
Change: 1 packages
Total download: 0 B
----------------------------------------------------------
Confirm changes: [Y/n] y
Downloading and Extracting Packages:
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
(gdk-pixbuf-test) C:\Users\straversaro>gdk-pixbuf-query-loaders
# GdkPixbuf Image Loader Modules file
# Automatically generated file, do not edit
# Created by gdk-pixbuf-query-loaders from gdk-pixbuf-2.42.10
#
# LoaderDir = C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test\Library\lib\gdk-pixbuf-2.0\2.10.0\loaders
#
# (edited, but it is working)
(gdk-pixbuf-test) C:\Users\straversaro>gdk-pixbuf-query-loaders
# packages in environment at C:\Users\straversaro\AppData\Local\miniforge3\envs\gdk-pixbuf-test:
#
# Name Version Build Channel
bzip2 1.0.8 hcfcfb64_5 conda-forge
gdk-pixbuf 2.42.10 h90a7034_4 conda-forge
lerc 4.0.0 h63175ca_0 conda-forge
libdeflate 1.19 hcfcfb64_0 conda-forge
libffi 3.4.2 h8ffe710_5 conda-forge
libglib 2.78.4 h55e6270_1 conda-forge
libiconv 1.17 hcfcfb64_2 conda-forge
libjpeg-turbo 3.0.0 hcfcfb64_1 conda-forge
libpng 1.6.43 h19919ed_0 conda-forge
libtiff 4.6.0 h6e2ebb7_2 conda-forge
libzlib 1.2.13 hcfcfb64_5 conda-forge
pcre2 10.42 h17e33f8_0 conda-forge
ucrt 10.0.22621.0 h57928b3_0 conda-forge
vc 14.3 hcf57466_18 conda-forge
vc14_runtime 14.38.33130 h82b7239_18 conda-forge
vs2015_runtime 14.38.33130 hcb4865c_18 conda-forge
xz 5.2.6 h8d14728_0 conda-forge
zstd 1.5.5 h12be248_0 conda-forge
C:\Users\straversaro>conda info
active environment : None
shell level : 0
user config file : C:\Users\straversaro\.condarc
populated config files : C:\Users\straversaro\AppData\Local\miniforge3\.condarc
C:\Users\straversaro\.condarc
conda version : 23.11.0
conda-build version : 3.28.4
python version : 3.10.13.final.0
solver : libmamba (default)
virtual packages : __archspec=1=x86_64
__conda=23.11.0=0
__cuda=12.3=0
__win=0=0
base environment : C:\Users\straversaro\AppData\Local\miniforge3 (writable)
conda av data dir : C:\Users\straversaro\AppData\Local\miniforge3\etc\conda
conda av metadata url : None
channel URLs : https://conda.anaconda.org/robostack-staging/win-64
https://conda.anaconda.org/robostack-staging/noarch
https://conda.anaconda.org/conda-forge/win-64
https://conda.anaconda.org/conda-forge/noarch
package cache : C:\Users\straversaro\AppData\Local\miniforge3\pkgs
C:\Users\straversaro\.conda\pkgs
C:\Users\straversaro\AppData\Local\conda\conda\pkgs
envs directories : C:\Users\straversaro\AppData\Local\miniforge3\envs
C:\Users\straversaro\.conda\envs
C:\Users\straversaro\AppData\Local\conda\conda\envs
platform : win-64
user-agent : conda/23.11.0 requests/2.31.0 CPython/3.10.13 Windows/10 Windows/10.0.22621 solver/libmamba conda-libmamba-solver/24.1.0 libmambapy/1.5.6
administrator : False
netrc file : None
offline mode : False
Note this is a copy of ContinuumIO/anaconda-issues#3380. I had the conda forge glib installed.
For a number of months now, anytime I import matplotlib or any other package that imports matplotlib I get the following warning. It takes over the input line. It is especially annoying when I tab complete from a pandas object and it makes it impossible to use. I have not been able to find a solution elsewhere online and my hunch is this is some issue with the anaconda libs conflicting with system libs. I think that it started when I upgraded to Ubuntu 17.04, but am not quite sure.
moorepants@garuda:~$ ipython
Python 3.5.3 | packaged by conda-forge | (default, May 12 2017, 15:07:14)
Type 'copyright', 'credits' or 'license' for more information
IPython 6.1.0 -- An enhanced Interactive Python. Type '?' for help.
In [1]: import matplotlib.pyplot as plt
In [2]: GLib-GIO-Message: Using the 'memory' GSettings backend. Your settings will not be saved or shared with other applications.
i use the following command to install the latest glib:
$ conda create -n glib-test -c defaults -c conda-forge python=2 glib=2.51.0
The installation fails with the error message below. The former version glib=2.48.0
works.
Is this maybe related to conda/conda-build#1482?
Current conda install:
platform : linux-64
conda version : 4.2.13
conda is private : False
conda-env version : 4.2.13
conda-build version : 2.0.11
python version : 2.7.12.final.0
requests version : 2.7.0
root environment : /home/pingu/anaconda (writable)
default environment : /home/pingu/anaconda
envs directories : /home/pingu/.conda/envs
/home/pingu/anaconda/envs
package cache : /home/pingu/.conda/envs/.pkgs
/home/pingu/anaconda/pkgs
channel URLs : https://repo.continuum.io/pkgs/free/linux-64
https://repo.continuum.io/pkgs/free/noarch
https://repo.continuum.io/pkgs/pro/linux-64
https://repo.continuum.io/pkgs/pro/noarch
https://conda.anaconda.org/birdhouse/linux-64
https://conda.anaconda.org/birdhouse/noarch
https://conda.anaconda.org/conda-forge/linux-64
https://conda.anaconda.org/conda-forge/noarch
config file : /home/pingu/.condarc
offline mode : False
`$ /home/pingu/anaconda/bin/conda create -n glib-test -c defaults -c conda-forge python=2 glib=2.51.0`
Traceback (most recent call last):
File "/home/pingu/anaconda/lib/python2.7/site-packages/conda/exceptions.py", line 479, in conda_exception_handler
return_value = func(*args, **kwargs)
File "/home/pingu/anaconda/lib/python2.7/site-packages/conda/cli/main.py", line 145, in _main
exit_code = args.func(args, p)
File "/home/pingu/anaconda/lib/python2.7/site-packages/conda/cli/main_create.py", line 68, in execute
install(args, parser, 'create')
File "/home/pingu/anaconda/lib/python2.7/site-packages/conda/cli/install.py", line 405, in install
execute_actions(actions, index, verbose=not context.quiet)
File "/home/pingu/anaconda/lib/python2.7/site-packages/conda/plan.py", line 643, in execute_actions
inst.execute_instructions(plan, index, verbose)
File "/home/pingu/anaconda/lib/python2.7/site-packages/conda/instructions.py", line 135, in execute_instructions
cmd(state, arg)
File "/home/pingu/anaconda/lib/python2.7/site-packages/conda/instructions.py", line 58, in EXTRACT_CMD
extract(arg)
File "/home/pingu/anaconda/lib/python2.7/site-packages/conda/install.py", line 810, in extract
t.extractall(path=temp_path)
File "/home/pingu/anaconda/lib/python2.7/tarfile.py", line 2079, in extractall
self.extract(tarinfo, path)
File "/home/pingu/anaconda/lib/python2.7/tarfile.py", line 2116, in extract
self._extract_member(tarinfo, os.path.join(path, tarinfo.name))
File "/home/pingu/anaconda/lib/python2.7/tarfile.py", line 2184, in _extract_member
os.makedirs(upperdirs)
File "/home/pingu/anaconda/lib/python2.7/os.py", line 150, in makedirs
makedirs(head, mode)
File "/home/pingu/anaconda/lib/python2.7/os.py", line 157, in makedirs
mkdir(name, mode)
OSError: [Errno 36] File name too long: '/home/pingu/.conda/envs/.pkgs/glib-2.51.0-1.tmp/share/gdb/auto-load/feedstock_root/build_artefacts/rec
ipe_root_1481139809452/_b_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho
ld_placehold_placehold_placehold_placehold_placehold_placehold_placehold_'
Issue: As of v2.53.5 this package no longer contains lib/libgobject-2.0.la
This is unfortunate, because other pkg-config files such as libglibmm-2.4.la
and libgiomm-2.4.la
still refer to this file.
conda list
):
Hoo boy. I just discovered a fun esoteric problem with the Linux binaries distributed with the new version 2.58.2.
This new version uses the Meson build system. It turns out that upon installation, Meson will automatically modify the RPATH data for ELF libraries and executables that it installs, doing the same sort of consistency work that the Conda build system does. The relevant file is called depfixer.py.
The problem is that the rewriting done during this process can create binaries that are OK according to the ELF spec, but are confusing to certain tools that are naive in how they parse ELF executables. Relevant discussion is here.
Unfortunately, one of these naive tools is ldconfig
. And in the case of our glib package, what happens is that ldconfig
decides that the SONAME of libgio-2.0.so
is actually \n
(i.e. a single newline character), which leads it to create a file called $PREFIX/lib/\n
โ the first time I've ever run across an instance of the fun Unix feature that it is legal to create files with newlines in their names. Note that if you readelf -d
the resulting file, you'll get the right answer, because readelf
is sufficiently smart. chrpath -l
will give you the wrong answer because it is not.
Finally, if you're trying to build a package that depends on glib and calls ldconfig
, this new file will confuse Conda's verifier that tries to compare the contents of the resulting tarball and the Conda file listing, resulting in a very very very hard-to-trace-down Exception('info/files')
.
I think the best solution here is to turn off Meson's RPATH munging. Unfortunately, I can't find a built-in way to turn it off, so I think we'll have to patch it.
CC @conda-forge/meson.
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