akhileshkaushal Goto Github PK
Name: Akhilesh Kaushal
Type: User
Company: Emory University
Location: Atlanta,GA
Name: Akhilesh Kaushal
Type: User
Company: Emory University
Location: Atlanta,GA
This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.
A tool that allows to get UMI counts from a single cell protein assay
Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments
Automated next generation DNA sequencing analysis pipeline suited for clinical tests, with >99.9% sensitivity to Sanger sequencing at read-depth>18
Website to analyze conflicting assertions in ClinVar
Coda: a convolutional denoising algorithm for genome-wide ChIP-seq data
OS-agnostic, system-level binary package manager and ecosystem
Computational reproducibility using Continuous Integration to produce verifiable end-to-end runs of scientific analysis.
Example of how continuous analysis can be used for RNA-Seq differential expression.
A R package for Grade of Membership model and Visualization of counts data:
The Python programming language
Analysis of Cancer Genomes; 2017 edition
A short script for converting .csv file data into an .fcs file, and vise versa.
CyTOF workflow. Version 3.
Useful small scripts for cytometry data management
Cheat Sheets
Jupyter notebooks for the code samples of the book "Deep Learning with Python"
A collaboratively written review paper on deep learning, genomics, and precision medicine
A list of deep learning implementations in biology
Using AWS RDS and S3 to store data about my dogs' vaccination and medical records. Creating an R shiny app to keep track of and share records with vets. :dog: :dog:
latent Dirichlet Process Regression for Genetic Prediction
DRAGEN open-source mapper
Metadata database for ENCODE project
eQTL analysis pipeline
Enhanced version of the FastQTL QTL mapper
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.