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Anatoly Buchin's Projects

dcluster icon dcluster

Clustering by fast search and find of density peaks

deepjazz icon deepjazz

Deep learning driven jazz generation using Keras & Theano!

diffxpy icon diffxpy

Differential expression analysis for single-cell RNA-seq data.

e2efold icon e2efold

pytorch implementation for "RNA Secondary Structure Prediction By Learning Unrolled Algorithms"

efel icon efel

Electrophys Feature Extraction Library

ephys_to_ttype icon ephys_to_ttype

Series of classifiers to find the correspondance between ephys features of neurons and their corresponding t-type.

episcanpy icon episcanpy

Episcanpy: Epigenomics Single Cell Analysis in Python

ewce icon ewce

Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.

gitwatch icon gitwatch

Watch a file or folder and automatically commit changes to a git repo easily.

gpt-neox icon gpt-neox

An implementation of model parallel autoregressive transformers on GPUs, based on the DeepSpeed library.

handson-ml icon handson-ml

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in python using Scikit-Learn and TensorFlow.

human_neuron_ih icon human_neuron_ih

This repository contains the simulation code to run single neuron simulations in the early version of bmtk (https://github.com/AllenInstitute/bmtk)

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