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it1728166827 edavalosanaya

vision6d's Issues

Add client and app runner

Instead of embedding the logic to create custom visualizations inside of Vision6D, it might be best to decouple these two separate implementations but connect them via socket networking. I propose that we use an HTTP server and a ZeroMQ to send data between Vision6D server and client.

Cannot run `vision6D` outside of the repo

If you run the vision6D entry point within the GitHub repo, it works. Outside, it does not.

This is the error:

(ettk_dev) eduardo@avocado-XPS-13-9300:~/GitHub$ vision6D
Traceback (most recent call last):
  File "/home/eduardo/anaconda3/envs/ettk_dev/bin/vision6D", line 5, in <module>
    from vision6D.entry.main import main
  File "/home/eduardo/GitHub/vision6D/vision6D/entry/main.py", line 16, in <module>
    from .. import MyMainWindow
ImportError: cannot import name 'MyMainWindow' from 'vision6D' (unknown location)

``vision6D`` entrypoint not working

When I tried to use the vision6D entrypoint, I got the following error:

(ettk_dev) eduardo@avocado-XPS-13-9300:~/GitHub/vision6D$ vision6D
Traceback (most recent call last):
  File "/home/eduardo/anaconda3/envs/ettk_dev/bin/vision6D", line 5, in <module>
    from entry.main import main
ModuleNotFoundError: No module named 'entry'

Export Image Crash!

After hours and hours of carefully dragging my 3D mesh to align the image (pixel-level precision), I was delighted with myself at the beauty!

I was all willy-nilly about to export my image and pose. To my horror, the system crashed! This is the error:

(ettk_dev) eduardo@avocado-XPS-13-9300:~/GitHub/vision6D$ vision6D
/home/eduardo/anaconda3/envs/ettk_dev/lib/python3.10/site-packages/pyvista/core/grid.py:873: PyVistaDeprecationWarning: `UniformGrid` is deprecated. Use `ImageData` instead.
  warnings.warn(
/home/eduardo/anaconda3/envs/ettk_dev/lib/python3.10/site-packages/pyvista/core/grid.py:873: PyVistaDeprecationWarning: `UniformGrid` is deprecated. Use `ImageData` instead.
  warnings.warn(
Traceback (most recent call last):
  File "/home/eduardo/GitHub/vision6D/vision6D/containers/image_container.py", line 91, in export_image
    if pathlib.Path(output_path).suffix == '': output_path = output_path.parent / (output_path.stem + '.png')
AttributeError: 'str' object has no attribute 'parent'
Aborted (core dumped)

missing dependency 


(plot3d) $ vision6D
Traceback (most recent call last):
  File "/home/nicole/anaconda3/envs/plot3d/bin/vision6D", line 5, in <module>
    from vision6D.entry.main import main
  File "/home/nicole/anaconda3/envs/plot3d/lib/python3.10/site-packages/vision6D/__init__.py", line 32, in <module>
    from .mainwindow import MyMainWindow
  File "/home/nicole/anaconda3/envs/plot3d/lib/python3.10/site-packages/vision6D/mainwindow/__init__.py", line 1, in <module>
    from .mainwindow import MyMainWindow
  File "/home/nicole/anaconda3/envs/plot3d/lib/python3.10/site-packages/vision6D/mainwindow/mainwindow.py", line 27, in <module>
    from ..widgets import CustomQtInteractor
  File "/home/nicole/anaconda3/envs/plot3d/lib/python3.10/site-packages/vision6D/widgets/__init__.py", line 7, in <module>
    from .draw_sam_window import SamWindow
  File "/home/nicole/anaconda3/envs/plot3d/lib/python3.10/site-packages/vision6D/widgets/draw_sam_window.py", line 18, in <module>
    from segment_anything import SamPredictor, sam_model_registry
ModuleNotFoundError: No module named 'segment_anything'

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