Comments (3)
xunchen85
commented on June 25, 2024
Hi, it should be because no TEs were detected in the earlier step. We currently make the tools to run with human genome. Maybe you could check the reference coordinates, is it named "chr1-24,X,Y"?
Xun
from ervcaller.
e-lerat
commented on June 25, 2024
Actually, it is not a human organism. I thought that using my own genome reference (-H) it would work.
from ervcaller.
xunchen85
commented on June 25, 2024
I see, it could also be used for other genomes with a bit changes to the code. Let me know if I could further help.
Xun
from ervcaller.
Related Issues (16)
- About input bam files HOT 2
- About required programs HOT 3
- About "xx_h1_sorted.bam" file HOT 4
- Step 2 - Improper reads onwards, bwa-mem fails to read index files
- 关于SE_MEI的问题 HOT 2
- Argument "-" isn't numeric in subtraction (-) at ERVcaller_v.1.3.pl line 1305, <OUT3> line 2. HOT 1
- Problem in Step 2 HOT 5
- Error unexpected end of file HOT 1
- The Requirement software HOT 1
- The help message of ERVcaller_v1.4.pl HOT 3
- Illegal division by zero HOT 8
- Error in User Manual HOT 1
- Error of Step 3 HOT 8
- Do you have any recommended standard filter? HOT 4
- same sample, different result. HOT 8
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from ervcaller.