Topic: tumor-heterogeneity Goto Github
Some thing interesting about tumor-heterogeneity
Some thing interesting about tumor-heterogeneity
tumor-heterogeneity,Refined SNV calling for tumor data using perfect phylogenies and ILP
User: alexandrutomescu
tumor-heterogeneity,A Fast Branch and Bound Algorithm for the Perfect Tumor Phylogeny Reconstruction Problem
User: algo-cancer
tumor-heterogeneity,R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of malignant cells, identifies subclonal structures and analyses the specific and shared alterations of each subpopulation.
User: antoniodefalco
Home Page: https://www.nature.com/articles/s41467-023-36790-9
tumor-heterogeneity,Analysis of treatment naive and neo-adjuvant chemotherapy treated high-grade serous ovarian cancer samples
Organization: cansysbio
tumor-heterogeneity,Phylogenies of Breast Cancer Brain Metastases
Organization: cmuschwartzlab
tumor-heterogeneity,Robust and Accurate Deconvolution
Organization: cmuschwartzlab
tumor-heterogeneity,Experiments for evaluating SECEDO, clustering tumor cells based on single cell sequencing data
User: danieldanciu
tumor-heterogeneity,scMuffin - A MUlti-Features INtegrative approach for SC data analysis
User: emosca-cnr
Home Page: https://emosca-cnr.github.io/scMuffin/
tumor-heterogeneity,An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.
User: fungest
tumor-heterogeneity,Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer
User: gavinha
tumor-heterogeneity,This repository contains the codes for the article: Data-driven mechanistic modeling of oxygen distribution and hypoxia profile in tumor microenvironment
User: its-pa1
tumor-heterogeneity,Reproducibility materials for "Bayesian Hierarchical Varying-sparsity Regression Models with Application to Cancer Proteogenomics" by Yang Ni, Francesco C. Stingo, Min Jin Ha, Rehan Akbani & Veerabhadran Baladandayuthapani
User: jasa-acs
Home Page: https://doi.org/10.1080/01621459.2018.1434529
tumor-heterogeneity,Reconstructing phylogenetic tree from noisy mutation profile of single cells
Organization: kchen-lab
tumor-heterogeneity,Texomer: Integrating Analysis of Cancer Genome and Transcriptome Sequencing Data
Organization: kchen-lab
tumor-heterogeneity,Copy number calling and variant classification using targeted short read sequencing
User: lima1
Home Page: https://bioconductor.org/packages/devel/bioc/html/PureCN.html
tumor-heterogeneity,This repo is for "Tumor Heterogeneity - Graduation Project"
User: mostafa20223
tumor-heterogeneity,Assessing tumor heterogeneity in bulk tumor DNA. Simulation of reads from a phylogenetic prior.
User: munozalexander
tumor-heterogeneity,A tool to find reads supporting/opposing structural variant breakpoints
User: nriddiford
tumor-heterogeneity,Scripts used for the paper Inglese, P., Correia, G., Pruski, P., Glen, R. C., & Takats, Z. (2019). Colocalization features for classification of tumors using desorption electrospray ionization mass spectrometry imaging. Analytical chemistry.
User: paoloinglese
tumor-heterogeneity,Clustering tumor cells based on SNVs from single-cell sequencing data
Organization: ratschlab
tumor-heterogeneity,Official repository of "Towards Learning Contrast Kinetics with Multi-Condition Latent Diffusion Models"
User: richardobi
Home Page: https://arxiv.org/abs/2403.13890
tumor-heterogeneity,This project provides an Spectre's implementation of Data Mining Group's algorithms for processing mass spectrometry imaging (MSI) datasets.
Organization: spectre-team
Home Page: https://spectre-team.github.io/
tumor-heterogeneity,SIFA: identify tumor subclones and infer phylogenetic tree from WGS data
User: zenglix
tumor-heterogeneity,Genetic Heterogeneity Profiling by Single Cell RNA Sequencing
User: zhouzilu
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