snewhouse Goto Github PK
Name: Stephen J Newhouse
Type: User
Bio: Data Scientist, Bioinformatician, Dad, Husband, MS warrior
Twitter: s_j_newhouse
Location: Wirral
Name: Stephen J Newhouse
Type: User
Bio: Data Scientist, Bioinformatician, Dad, Husband, MS warrior
Twitter: s_j_newhouse
Location: Wirral
A collection of docker recipes
Alpine Linux Docker image. Win at minimalism!
Docker Cheat Sheet
Docker Desktop enables you to create virtual desktops that can be accessed remotely. It comes with Firefox and Libreoffice already installed!
:whale::bar_chart::books: Docker Images for NGS data preprocessing
:whale::bar_chart::books: Docker Images tracking the stable Galaxy releases.
Dockerfile for speedseq
Squash docker images to make them smaller
Opinionated stacks of ready-to-run Jupyter applications in Docker.
An on demand Docker virtual machine, thanks to Vagrant and boot2docker. Works great on Macs and other platforms that don't natively support the Docker daemon. Support VirtualBox, VMware, and Parallels.
:electron: Build cross-platform desktop apps with JavaScript, HTML, and CSS
python script to programmatically enrich your data using Enrichr API
Ensembl tools including the VEP
WIP & POC: Count Viral and other non-human genome signatures in Human NGS data
A tool for estimating repeat sizes
Small utilities for working with fastq sequence files.
FASTA/FASTQ pre-processing programs
A WGS de novo assembler based on the FMD-index for large genomes
A tool for clinicians and researchers to generate visualizations and metrics from patient-reported outcomes using FHIR, Elasticsearch, and Kibana.
Efficient base quality score recalibrator for NGS data
Application Link
:books: Freely available programming books
Bayesian haplotype-based polymorphism discovery and genotyping.
The environment is designed for time efficient Angular2 app development, using TypeScript, Jade and Sass.
Elasticsearch File System Crawler (FS Crawler)
Data intensive science for everyone.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.