Comments (5)
It should be robust to that but I will have to double check. Is there any way that you could share the psm file and at least one raw file so that I can reproduce the error? Then I will fix it. Thanks.
from flashlfq.
Sure, thank you. Here:
Default PSM Report.txt
Link for raw file: https://ualg365-my.sharepoint.com/:i:/g/personal/csraposo_ualg_pt/EWnRq3CgWF9Gtd9qIW-4GPEBXN2H6Vqp27YOGfMwa7gwow?e=1r0PAh
from flashlfq.
FlashLFQ can handle some instances of multiple .s but your presents a funny case. In the peptide shaker output it thinks the .3 is the file extension. The easiest solution is to add .raw to all the text in the column labeled "Spectrum File". Will you give that a try please? I did the relabeling on the file you sent to me. maybe you could try it?
from flashlfq.
from flashlfq.
That worked perfectly! Thank you for your help
from flashlfq.
Related Issues (20)
- Support for Percolator output files HOT 77
- Advice on parameter setting HOT 10
- RT alignment? HOT 2
- Support for more conditions
- FlashLFQ normalization issue HOT 8
- setting up license on linux HOT 2
- FlashLFQ crashed HOT 1
- extra trailing tab in output HOT 1
- will/does it support timsTOF data? HOT 1
- Question about quantification
- crashed - invalid parametrization for the distribution HOT 6
- Enquiry on where the actual namespace for FlashLFQ exists HOT 2
- Question about using with PeptideShaker HOT 3
- No Posterior Error Probability in Bayesian Protein Fold Change Analysis in Command Line tool
- Shared peptide quantification
- mzML quant error : Index was outside the bounds of the array. HOT 8
- Could not run in Mac OS 13.6
- Header of output file(s) HOT 2
- Remove extra tab from header
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from flashlfq.