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wolfpsort's Introduction

==Note from maintainer==
As the original website has been down for more than a month and the license
allows redistribution for academic purposes I am rehosting so that other 
academics can find and use this tool locally if they need it. 
All rights as per original license and belonging to Paul Horton - FM

==Original README==
WoLF PSORT Package Command Line Version 0.2 README document
Author: Paul Horton
Copyright: All Rights Reserved
Created: 2005/9/2
Last Modified: $Date: 2006/08/28 10:43:18 $


START

Please first read this documents:

  ./CITATION
  ./INSTALL


EXECUTION

This package contains two scripts to be directly executed:

  ./bin/runWolfPsortSummary, and ./bin/runWolfPsortHtmlTables


For a simple, text based, summarized prediction result use:

  ./bin/runWolfPsortSummary fungi < ./bin/testQuery.fasta


# NOTE THIS DOESN'T WORK AUTOMATICALLY #
For a more elaborate and informative html version use: 

  ./bin/runWolfPsortHtmlTables fungi testOut/ queryName < ./bin/testQuery.fasta

In this case the results will be written to the directory "testOut/"
(which use should create first, the script will not create it for you.

To view the results point an html browser at testOut/htdocs/results/queryName.html

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