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qbic-pwresetd

Password reset daemon for QBiC services

qflow

Portlet for workflow functionality containing admin panel and workflow monitor

qmsfc

Data and code for the `Multiomics surface receptor profiling of the NCI-60 tumor cell panel uncovers novel theranostics for cancer immunotherapy` paper.

qoffer-portlet

QBiC offer generator aims to fulfill quotation preparation processes in a fully automatised fashion.

r-container-lib

A collection of project-related Dockerfiles for a controlled R environment with defined R packages

r-container-template

A collection of project-related R scripts with defined package lists and Dockerfiles for reproducible R environments

repowiz-cli

Repository wizard RepoWiz helps to make your data publicly available

rmageddon-cli

A small linting command line tool for R container evaluation

rnaseq-power-container

Singularity container for RNA-Seq power analysis

sample-cleaner-cli

Command line tool to delete samples from the tracking system

sample-notificator-cli

A command line tool to handle sample status change notifications

sample-status-reporter

This application collects sample status information and reports it to QBiC

sample-status-updater-cli

Performs post registration tasks after samples have been registered in openBIS, using the openBIS API. To be used as a cron job.

sample-tracking-helper-lib

An easy to use interface providing sample tracking update functions for ETL scripts

sample-tracking-service

Service that implements a sample tracking interface.

sample-tracking-status-overview

Gives a visual overview of sample statuses

sample-tracking-status-portlet

Portlet to query satus, location and general information of samples

sample-tracking-update-portlet

Portlet to update sample status, location and general information

sarek-starter-cli

Various python scripts for bioinformatics data analysis and pre-processing

scark-cli

services-testing-portlet

A portlet to test services related libraries

spark-service

spring-boot-rest-service-template

A template repository for REST services with Spring Boot

spring-boot-starter-template

A minimal working starter template for Spring Boot applications

statistics-cli

This tools is responsible for data retrieval and formatting, in order to visualize data on our homepage.

statistics-plugin

This repo contains shared classes between the qbic-statistics portlet and the statistics-data-retrieval repo

statistics-portlet

subscription-cancel-portlet

Small app that executes the subscription cancellation

subscription-service

A small REST service to handle sample status tracking subscriptions.

trello-script

This repository holds a collection of scripts, which use the Trello API to easily access the information stored on a Trello Board