Dive into the World of Protein Structure Analysis! Are you ready to explore the fascinating realm of protein design predictions with unparalleled ease? TMalign is your go-to tool for high-throughput TMscore retrieval, offering a seamless way to compare your library of predicted protein structures against a ground truth PDB structure. Whether you're a seasoned researcher or just starting out, TMalign is designed to streamline your workflow and enhance your research capabilities.

Efficiency at Its Best: With TMalign, you can quickly compute and extract TMscores, saving you valuable time and effort. Accuracy You Can Trust: Get reliable, precise comparisons between your predicted structures and the ground truth. User-Friendly Process: Our straightforward approach means you spend less time figuring out software and more time making groundbreaking discoveries.

Step 1: Compute TMscores

Compute TMscores between a ground structure and a library of design sequences

cd scripts
sh compute_TMscore.sh

Extract TMscores from output files which were created by TMalign algorithm:

cd scripts
sh extract_TMscores.sh