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computes most of information functions (joint entropy, conditional, mutual information, total correlation information distance) and deep information networks

License: Other

Python 93.35% HTML 0.10% CSS 0.04% JavaScript 1.33% C 4.14% Fortran 0.10% Cython 0.94%
topological-data-analysis information-theory statistical-structures complex-systems statistical-mechanics deep-learning mutual-information entropy conditional-probability causal-inference

infotopopy's People

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pierrebaudot avatar renxida avatar valentynbez avatar

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infotopopy's Issues

some questions

Hello, I want to calculate multivariate joint entropies about 80 sites which contains three parameter. My sample data is follow:

precipitation lst soilmoisture
228 12.8923 8.04612
245 12.1109 6.95139
281 11.2158 10.6917
225 5.90652 7.37776
262 6.30347 9.76893
361 8.00681 9.26292
606 14.35 11.7481
231 4.61978 4.34707
510 10.8987 7.08284
One row is a site, I need to calculate multivariate sites's joint entropies. Can I use the package. Could you tell me how to use this package to calculate the values. If not, Could you give me some suggestions to solve the problem. Thank you.
I used the "infotopo" ,but always happens error when I import the package of "infotopo".

Could not pip install had to move files

In order for setup.findpackages to find packages during install I had to move init.py and infotopo.py to a separate folder named "infotopo". Installing from tar.gz or the PyPi archive does not work.

PyPi installation does not work

Hi Pierre!

I loved your work. Reading your slides was a treat. And I'm super excited about using your tool.

One thing though is, running
pip install infotopo
and then doing
import infotopo

gives me a "no such module" error.

I'm guessing it has something to do with pip install giving me only ~/xr5ry/anaconda3/lib/python3.9/site-packages/infotopo-0.2.10.dist-info and not the actual code.

If you're actively maintaining this repo, please just let me know how I can help and I'll provide more information or, if you'd like, attempt to fix it and submit a pull request!

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