Code Monkey home page Code Monkey logo

sol_concept's Introduction

sol.sh

Sol is a distributed computation program capable of combining OpenTopography Lidar data and DAYMET weather data to compute an Effective Energy to Mass Trasfer DEM. Sol uses GRASS GIS, R, and DaymetR behind the scenes to perform computation. Because this computation is computationally difficult, Sol uses Makeflow and WorkQueue to distribute the workload across as many systems as desired.

Installation

Pre-Installation Requirements: Debain Operating System

Instructions: On a ubuntu system of your choice download the Sol program to your home directory.

To install Sol Master Node run:

sudo ./install_master.sh
source ~/.bashrc
iinit
grass64

To install Sol Worker Nodes run:

sudo ./install_worker.sh
source ~/.bashrc
grass64

The initialization parameters for iinit are:

Item Value
Host Server data.iplantcollaborative.com
Port 1247
Username <your iplant username>
Password <Your iplant passsord>

To initialize the grass location first run grass64

<ESC><ENTER>
y
y
D
y
<Enter a 1 line description here>y
y
lcc
y
wgs84
<ENTER>
<ENTER>
<ESC><ENTER>
y
<ENTER>
<ESC><ENTER>
exit

Executing

To run the master node simply call sol_master.sh <DEM> <Metadata> Year, giving it the path to your OpenTopo DEM, and OpenTopo Metadata File and the year you wish to compute.

To automatically run a Sol Worker call sol_worker.sh for as many workers as you desire. (Note: Exceeding the number of cores you have is highly unrecommended.

To add workers, on any machine with Makeflow/Workqueue installed run work_queue_worker -N ACIC3 -p 5550 as many times as workers as you want. We recommend 1 worker per processing core.

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.