Unable to run the package due to pandas issue. I am attaching the screenshot for the error generated. about pywgcna HOT 6 CLOSED

Hi,

did you try installing pandas separately?
Were you able to install PyWGCNA without any errors?

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Dear Author
I tried install version 1.4.4, 1.5.3, 2.1.0 seperately without any success.
The PyWGCNA installation does not throw any error. Currently, I am trying to install all requirements seperately.
Will update if it works.

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Dear Author
I think the Python version 3.10.13 does not have any issue with installing pandas version 2.1.1. May be a bug with other python version. It would be helpful if compiling the requirements with python version 3.10.13. I have not tried other higher versions but hopefully they will work.
regards
Tanuj

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Hi @tanush84 ,

Sorry, I couldn’t catch the problem here.
were you able to execute pip install PyWGCNA -U without any error? if yes which version of pandas were installed along with PyWGCNA?

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Hello @nargesr ,
Yes I was able to install the PyWGCNA without any error. It worked by initially created conda environment using python version 3.10.13.
Then I installed pandas version 2.1.0 using conda install -c conda-forge pandas==2.1.0.
Then I install PyWGCNA using Pip
pip install PyWGCNA

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Hi,

and you couldn’t import pyWGCNA and pandas packages in your notebook?
To me, it's more like a problem with your conda environment. I tried to install PyWGCNA using Python 3.9/10/11 and everything was fine

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