Comments (1)
nargesr
commented on July 26, 2024
Hi @NezaCankar
According to the error, you need to also change the index in self.datME.
I will try to add a change module color function in the next release but it will take some time so meanwhile you can try to change the color in self.datME.
about other questions:
Q1: Default is without any background but you can add your customer background.
please look at the API documentation and GSEAPY package for more information about how you should pass your background.
Q2: I didn't get your question completely! based on what value do you want to compare your modules?
Q3: Yes! Eigengene values are stored in self.datME.
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