ortholog-phenotype tab should give indication of source/species on main table about monarch-ui HOT 9 CLOSED

here is the biolink call, looks like species is incuded, https://api-dev.monarchinitiative.org/api/bioentity/gene/HGNC:17158/ortholog/phenotypes?fetch_objects=true&start=0&rows=25

from monarch-ui.

@monicacecilia Do we want to add a new column to the table that will show the species? Should we show the common species name and make it a URL to the NCBI taxon site? If this is the case then I think this would be a good JAX issue.

from monarch-ui.

Yes, let's show species information on the table as well. A good ticket for JAX. I'm assigning to you guys and you can distribute / assign internally as appropriate.

from monarch-ui.

Not sure why this was closed

https://beta.monarchinitiative.org/gene/HGNC:10848#homolog

Says human for all, even ZFIN etc

from monarch-ui.

The ticket was for adding species to the ortholog-phenotype tab, which was added with #157 but it looks like there is a bug on the homolog tab, we should we showing the taxon of the object in the association

from monarch-ui.

Can someone clarify when we want to show object vs subject on a per tab basis?

Homolog - Subject
Ortholog* - Object?

from monarch-ui.

https://github.com/monarch-initiative/monarch-app/tree/master/conf/golr-views/single-tab under result_weights is what we have configured on legacy:

grep -P '(subject|object)_taxon\^' *

I think in the majority of cases, we want to show the subject taxon (if we're showing it at all). For the homolog table we want to show the object taxon.

from monarch-ui.

ah yes feel free to make a new ticket

from monarch-ui.

This should be okay to close now yeah?

from monarch-ui.