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vice's Issues

Update unittests in branch *main*

Unittests in main need to be updated. Currently, they are implemented using an old version of the code, where an object-oriented-programming paradigm was not yet applied.

util has no attributes get_batches

Hi, I was running the provided evaluation code and ran into the following error.

Traceback (most recent call last):
  File "VICE/main_robustness_eval.py", line 312, in <module>
    evaluate_models(
  File "VICE/main_robustness_eval.py", line 237, in evaluate_models
    val_batches = utils.get_batches(
                  ^^^^^^^^^^^^^^^^^
AttributeError: module 'utils' has no attribute 'get_batches'

Could you point me to this function? Thanks!

Rewrite tripletize.py in an object-oriented manner

Currently, tripletize.py uses functions to tripletize the data. However, it'd be cleaner and more in line with the other files to be re-written in an object-oriented way (e.g., Tripletizer(**kwargs)).

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