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lrg-omics's Introduction

Python Package Python version Documentation Status Total alerts Language grade: Python

LRG codebase for omics integration

Lewis Research Group (LRG) codebase for omics data generation, processing, quality control and integration.

Documentation

Download and install from source

git clone https://github.com/LSARP/lrg-omics

cd lrg-omics
conda env create -f dev/conda/environment.yml
conda activate lrg-omics-dev
pip install -e .

Install LRG kernel in JupyterLab

jupyter labextension install [email protected]
jupyter labextension install @jupyter-widgets/jupyterlab-manager [email protected]
ipython kernel install --name "LRG" --user

Authors

  • Soren Wacker
  • Mario Ernesto-Valdés
  • Luis Ponce Alvares
  • Estefania Barreto-Ojeda (@ojeda-e)

lrg-omics's People

Contributors

sorenwacker avatar luis-ponce avatar marioernestovaldes avatar

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